Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.91■□□□□ 0.62
NKX6-2Q9C056 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX6-2Q9C056 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX6-2Q9C056 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.89■□□□□ 0.62
NKX6-2Q9C056 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.89■□□□□ 0.62
NKX6-2Q9C056 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
NKX6-2Q9C056 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-2Q9C056 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-2Q9C056 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-2Q9C056 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-2Q9C056 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-2Q9C056 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-2Q9C056 AP003733.4-201ENST00000623785 1697 ntBASIC18.89■□□□□ 0.61
NKX6-2Q9C056 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-2Q9C056 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-2Q9C056 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 AC127496.7-201ENST00000625110 1798 ntBASIC18.86■□□□□ 0.61
NKX6-2Q9C056 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-2Q9C056 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 LINC00273-201ENST00000539813 1452 ntBASIC18.85■□□□□ 0.61
NKX6-2Q9C056 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NKX6-2Q9C056 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-2Q9C056 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX6-2Q9C056 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.83■□□□□ 0.61
NKX6-2Q9C056 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX6-2Q9C056 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NKX6-2Q9C056 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NKX6-2Q9C056 AL137060.1-201ENST00000618151 2648 ntBASIC18.83■□□□□ 0.61
NKX6-2Q9C056 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX6-2Q9C056 AC141586.4-201ENST00000624558 1573 ntBASIC18.83■□□□□ 0.6
NKX6-2Q9C056 LINC00526-201ENST00000581067 1875 ntBASIC18.83■□□□□ 0.6
NKX6-2Q9C056 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX6-2Q9C056 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms