Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.36■■■□□ 2.45
ZNF428Q96B54 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZNF428Q96B54 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
ZNF428Q96B54 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZNF428Q96B54 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZNF428Q96B54 MIR6089-201ENST00000616698 64 ntBASIC30.35■■■□□ 2.45
ZNF428Q96B54 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZNF428Q96B54 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZNF428Q96B54 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.34■■■□□ 2.45
ZNF428Q96B54 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
ZNF428Q96B54 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZNF428Q96B54 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.34■■■□□ 2.45
ZNF428Q96B54 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.34■■■□□ 2.45
ZNF428Q96B54 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.34■■■□□ 2.45
ZNF428Q96B54 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
ZNF428Q96B54 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZNF428Q96B54 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ZNF428Q96B54 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
ZNF428Q96B54 AL592295.1-201ENST00000400984 884 ntBASIC30.33■■■□□ 2.45
ZNF428Q96B54 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ZNF428Q96B54 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ZNF428Q96B54 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ZNF428Q96B54 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.32■■■□□ 2.44
ZNF428Q96B54 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
ZNF428Q96B54 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
ZNF428Q96B54 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ZNF428Q96B54 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ZNF428Q96B54 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
ZNF428Q96B54 AC022616.5-201ENST00000518796 181 ntBASIC30.3■■■□□ 2.44
ZNF428Q96B54 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.3■■■□□ 2.44
ZNF428Q96B54 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ZNF428Q96B54 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
ZNF428Q96B54 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
ZNF428Q96B54 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZNF428Q96B54 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
ZNF428Q96B54 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.29■■■□□ 2.44
ZNF428Q96B54 AC239859.2-201ENST00000444165 318 ntBASIC30.29■■■□□ 2.44
ZNF428Q96B54 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.29■■■□□ 2.44
ZNF428Q96B54 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.29■■■□□ 2.44
ZNF428Q96B54 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZNF428Q96B54 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZNF428Q96B54 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
ZNF428Q96B54 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.28■■■□□ 2.44
ZNF428Q96B54 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZNF428Q96B54 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.28■■■□□ 2.44
ZNF428Q96B54 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.27■■■□□ 2.44
ZNF428Q96B54 AP003733.4-201ENST00000623785 1697 ntBASIC30.27■■■□□ 2.44
ZNF428Q96B54 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ZNF428Q96B54 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
ZNF428Q96B54 GUSBP5-201ENST00000418136 578 ntBASIC30.27■■■□□ 2.44
ZNF428Q96B54 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ZNF428Q96B54 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ZNF428Q96B54 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
ZNF428Q96B54 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ZNF428Q96B54 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
ZNF428Q96B54 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.26■■■□□ 2.43
ZNF428Q96B54 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.26■■■□□ 2.43
ZNF428Q96B54 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ZNF428Q96B54 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ZNF428Q96B54 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ZNF428Q96B54 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ZNF428Q96B54 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
ZNF428Q96B54 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.26■■■□□ 2.43
ZNF428Q96B54 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.25■■■□□ 2.43
ZNF428Q96B54 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.25■■■□□ 2.43
ZNF428Q96B54 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.25■■■□□ 2.43
ZNF428Q96B54 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.25■■■□□ 2.43
ZNF428Q96B54 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ZNF428Q96B54 AC131212.1-201ENST00000613771 668 ntBASIC30.24■■■□□ 2.43
ZNF428Q96B54 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ZNF428Q96B54 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.23■■■□□ 2.43
ZNF428Q96B54 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZNF428Q96B54 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ZNF428Q96B54 THA1P-201ENST00000590384 1145 ntBASIC30.23■■■□□ 2.43
ZNF428Q96B54 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZNF428Q96B54 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZNF428Q96B54 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZNF428Q96B54 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.23■■■□□ 2.43
ZNF428Q96B54 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.22■■■□□ 2.43
ZNF428Q96B54 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
ZNF428Q96B54 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.22■■■□□ 2.43
ZNF428Q96B54 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ZNF428Q96B54 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
ZNF428Q96B54 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
ZNF428Q96B54 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
ZNF428Q96B54 AC138932.3-201ENST00000567634 1902 ntBASIC30.22■■■□□ 2.43
ZNF428Q96B54 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.22■■■□□ 2.43
ZNF428Q96B54 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ZNF428Q96B54 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.2■■■□□ 2.43
ZNF428Q96B54 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.2■■■□□ 2.43
ZNF428Q96B54 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
ZNF428Q96B54 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
ZNF428Q96B54 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.19■■■□□ 2.42
ZNF428Q96B54 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms