Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RFX6Q8HWS3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RFX6Q8HWS3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RFX6Q8HWS3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RFX6Q8HWS3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.34■■□□□ 1.49
RFX6Q8HWS3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.34■■□□□ 1.49
RFX6Q8HWS3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RFX6Q8HWS3 U85056.1-201ENST00000616429 682 ntBASIC24.33■■□□□ 1.49
RFX6Q8HWS3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RFX6Q8HWS3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RFX6Q8HWS3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 RPS2P7-201ENST00000447334 885 ntBASIC24.32■■□□□ 1.48
RFX6Q8HWS3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX6Q8HWS3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 DUX4L9-201ENST00000449051 1259 ntBASIC24.31■■□□□ 1.48
RFX6Q8HWS3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.31■■□□□ 1.48
RFX6Q8HWS3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX6Q8HWS3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 MIR6765-201ENST00000614092 87 ntBASIC24.29■■□□□ 1.48
RFX6Q8HWS3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX6Q8HWS3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
RFX6Q8HWS3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RFX6Q8HWS3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.28■■□□□ 1.48
RFX6Q8HWS3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.28■■□□□ 1.48
RFX6Q8HWS3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RFX6Q8HWS3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RFX6Q8HWS3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX6Q8HWS3 LINC00543-201ENST00000567234 1845 ntBASIC24.26■■□□□ 1.47
RFX6Q8HWS3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.26■■□□□ 1.47
RFX6Q8HWS3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFX6Q8HWS3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.26■■□□□ 1.47
RFX6Q8HWS3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RFX6Q8HWS3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RFX6Q8HWS3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RFX6Q8HWS3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 KRT18P60-201ENST00000312876 1297 ntBASIC24.23■■□□□ 1.47
RFX6Q8HWS3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 AC129492.7-201ENST00000622992 756 ntBASIC24.23■■□□□ 1.47
RFX6Q8HWS3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RFX6Q8HWS3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms