Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDKAL1Q5VV42 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDKAL1Q5VV42 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CDKAL1Q5VV42 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDKAL1Q5VV42 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CDKAL1Q5VV42 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.81■■□□□ 1.72
CDKAL1Q5VV42 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.81■■□□□ 1.72
CDKAL1Q5VV42 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 HLA-L-211ENST00000482052 1765 ntBASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.8■■□□□ 1.72
CDKAL1Q5VV42 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CDKAL1Q5VV42 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.79■■□□□ 1.72
CDKAL1Q5VV42 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.79■■□□□ 1.72
CDKAL1Q5VV42 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.79■■□□□ 1.72
CDKAL1Q5VV42 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDKAL1Q5VV42 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDKAL1Q5VV42 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDKAL1Q5VV42 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDKAL1Q5VV42 AC026202.3-201ENST00000600805 1127 ntBASIC25.78■■□□□ 1.72
CDKAL1Q5VV42 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CDKAL1Q5VV42 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDKAL1Q5VV42 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDKAL1Q5VV42 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDKAL1Q5VV42 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.77■■□□□ 1.72
CDKAL1Q5VV42 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
CDKAL1Q5VV42 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
CDKAL1Q5VV42 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDKAL1Q5VV42 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDKAL1Q5VV42 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDKAL1Q5VV42 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.76■■□□□ 1.71
CDKAL1Q5VV42 FOXO3B-201ENST00000395675 1928 ntBASIC25.76■■□□□ 1.71
CDKAL1Q5VV42 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.76■■□□□ 1.71
CDKAL1Q5VV42 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CDKAL1Q5VV42 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
CDKAL1Q5VV42 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CDKAL1Q5VV42 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 ABCB10P4-201ENST00000566803 2184 ntBASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDKAL1Q5VV42 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDKAL1Q5VV42 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.73■■□□□ 1.71
CDKAL1Q5VV42 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDKAL1Q5VV42 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDKAL1Q5VV42 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.72■■□□□ 1.71
CDKAL1Q5VV42 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDKAL1Q5VV42 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
CDKAL1Q5VV42 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CDKAL1Q5VV42 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDKAL1Q5VV42 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDKAL1Q5VV42 MIR4449-201ENST00000578365 66 ntBASIC25.7■■□□□ 1.7
CDKAL1Q5VV42 AC133561.1-201ENST00000568600 2415 ntBASIC25.7■■□□□ 1.7
CDKAL1Q5VV42 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 KRT18P10-201ENST00000388836 1287 ntBASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDKAL1Q5VV42 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 GPX1-201ENST00000419349 1106 ntBASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CDKAL1Q5VV42 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms