Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM24O15164 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.25■■□□□ 1.47
TRIM24O15164 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM24O15164 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.24■■□□□ 1.47
TRIM24O15164 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM24O15164 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM24O15164 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM24O15164 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.23■■□□□ 1.47
TRIM24O15164 TSPY9P-201ENST00000440215 945 ntBASIC24.23■■□□□ 1.47
TRIM24O15164 TSPY11P-201ENST00000442607 1045 ntBASIC24.23■■□□□ 1.47
TRIM24O15164 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.23■■□□□ 1.47
TRIM24O15164 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TRIM24O15164 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.23■■□□□ 1.47
TRIM24O15164 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TRIM24O15164 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.23■■□□□ 1.47
TRIM24O15164 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM24O15164 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM24O15164 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.22■■□□□ 1.47
TRIM24O15164 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.22■■□□□ 1.47
TRIM24O15164 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM24O15164 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM24O15164 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM24O15164 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.21■■□□□ 1.47
TRIM24O15164 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM24O15164 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM24O15164 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
TRIM24O15164 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM24O15164 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.2■■□□□ 1.46
TRIM24O15164 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
TRIM24O15164 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.2■■□□□ 1.46
TRIM24O15164 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.2■■□□□ 1.46
TRIM24O15164 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM24O15164 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM24O15164 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM24O15164 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM24O15164 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM24O15164 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.2■■□□□ 1.46
TRIM24O15164 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.19■■□□□ 1.46
TRIM24O15164 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.19■■□□□ 1.46
TRIM24O15164 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.19■■□□□ 1.46
TRIM24O15164 FOXO3B-201ENST00000395675 1928 ntBASIC24.19■■□□□ 1.46
TRIM24O15164 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM24O15164 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM24O15164 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM24O15164 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM24O15164 KRT16P3-201ENST00000439127 1283 ntBASIC24.18■■□□□ 1.46
TRIM24O15164 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM24O15164 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.18■■□□□ 1.46
TRIM24O15164 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.18■■□□□ 1.46
TRIM24O15164 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM24O15164 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM24O15164 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.18■■□□□ 1.46
TRIM24O15164 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM24O15164 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM24O15164 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM24O15164 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
TRIM24O15164 AC091060.1-201ENST00000623524 1766 ntBASIC24.17■■□□□ 1.46
TRIM24O15164 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM24O15164 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM24O15164 AC092028.1-203ENST00000608262 953 ntBASIC24.17■■□□□ 1.46
TRIM24O15164 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM24O15164 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM24O15164 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM24O15164 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM24O15164 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.16■■□□□ 1.46
TRIM24O15164 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.16■■□□□ 1.46
TRIM24O15164 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM24O15164 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM24O15164 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM24O15164 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM24O15164 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.15■■□□□ 1.46
TRIM24O15164 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM24O15164 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM24O15164 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.14■■□□□ 1.45
TRIM24O15164 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRIM24O15164 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
TRIM24O15164 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.14■■□□□ 1.45
TRIM24O15164 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM24O15164 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRIM24O15164 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
TRIM24O15164 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM24O15164 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.13■■□□□ 1.45
TRIM24O15164 AC011551.1-201ENST00000614101 683 ntBASIC24.13■■□□□ 1.45
TRIM24O15164 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM24O15164 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
TRIM24O15164 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM24O15164 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.12■■□□□ 1.45
TRIM24O15164 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM24O15164 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM24O15164 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM24O15164 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
TRIM24O15164 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM24O15164 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM24O15164 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM24O15164 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM24O15164 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM24O15164 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM24O15164 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
TRIM24O15164 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.11■■□□□ 1.45
TRIM24O15164 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms