Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 WHAMMP2-203ENST00000563942 1603 ntBASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 AC006077.2-201ENST00000623591 457 ntBASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV22A0A0B4J277 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 AC141586.4-201ENST00000624558 1573 ntBASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV22A0A0B4J277 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV22A0A0B4J277 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV22A0A0B4J277 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 EP400NL-214ENST00000641289 2402 ntBASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV22A0A0B4J277 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV22A0A0B4J277 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV22A0A0B4J277 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms