Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 RMA1YKL132C 1293 nt11.06□□□□□ -0.64
NUP42P49686 SCO2YBR024W 906 nt11.06□□□□□ -0.64
NUP42P49686 YHP1YDR451C 1062 nt11.03□□□□□ -0.64
NUP42P49686 YNL165WYNL165W 1221 nt11.03□□□□□ -0.64
NUP42P49686 TRN1tP(UGG)A 72 nt10.99□□□□□ -0.65
NUP42P49686 SUF9tP(UGG)F 72 nt10.99□□□□□ -0.65
NUP42P49686 SUF8tP(UGG)H 72 nt10.99□□□□□ -0.65
NUP42P49686 tP(UGG)LtP(UGG)L 72 nt10.99□□□□□ -0.65
NUP42P49686 SUF7tP(UGG)M 72 nt10.99□□□□□ -0.65
NUP42P49686 tP(UGG)N1tP(UGG)N1 72 nt10.99□□□□□ -0.65
NUP42P49686 tP(UGG)N2tP(UGG)N2 72 nt10.99□□□□□ -0.65
NUP42P49686 tP(UGG)O1tP(UGG)O1 72 nt10.99□□□□□ -0.65
NUP42P49686 SUF11tP(UGG)O2 72 nt10.99□□□□□ -0.65
NUP42P49686 LSM12YHR121W 564 nt10.99□□□□□ -0.65
NUP42P49686 FTR1YER145C 1215 nt10.97□□□□□ -0.65
NUP42P49686 AIM41YOR215C 558 nt10.96□□□□□ -0.65
NUP42P49686 RVS167YDR388W 1449 nt10.94□□□□□ -0.66
NUP42P49686 MPC1YGL080W 393 nt10.94□□□□□ -0.66
NUP42P49686 CCC1YLR220W 969 nt10.94□□□□□ -0.66
NUP42P49686 BNA3YJL060W 1335 nt10.93□□□□□ -0.66
NUP42P49686 YNL234WYNL234W 1281 nt10.91□□□□□ -0.66
NUP42P49686 PUT4YOR348C 1884 nt10.91□□□□□ -0.66
NUP42P49686 YSP3YOR003W 1437 nt10.91□□□□□ -0.66
NUP42P49686 YMR306C-AYMR306C-A 390 nt10.89□□□□□ -0.67
NUP42P49686 PZF1YPR186C 1290 nt10.87□□□□□ -0.67
NUP42P49686 MAS1YLR163C 1389 nt10.87□□□□□ -0.67
NUP42P49686 GET2YER083C 858 nt10.86□□□□□ -0.67
NUP42P49686 SIR2YDL042C 1689 nt10.85□□□□□ -0.67
NUP42P49686 YOL085CYOL085C 342 nt10.84□□□□□ -0.67
NUP42P49686 MRS3YJL133W 945 nt10.81□□□□□ -0.68
NUP42P49686 ATG22YCL038C 1587 nt10.81□□□□□ -0.68
NUP42P49686 PUS7YOR243C 2031 nt10.79□□□□□ -0.68
NUP42P49686 BSP1YPR171W 1731 nt10.78□□□□□ -0.68
NUP42P49686 MRPL36YBR122C 534 nt10.77□□□□□ -0.69
NUP42P49686 GAT1YFL021W 1533 nt10.76□□□□□ -0.69
NUP42P49686 RRP1YDR087C 837 nt10.76□□□□□ -0.69
NUP42P49686 MMS21YEL019C 804 nt10.76□□□□□ -0.69
NUP42P49686 IDP3YNL009W 1263 nt10.76□□□□□ -0.69
NUP42P49686 UME6YDR207C 2511 nt10.75□□□□□ -0.69
NUP42P49686 YAL016C-BYAL016C-B 186 nt10.74□□□□□ -0.69
NUP42P49686 PCL10YGL134W 1302 nt10.74□□□□□ -0.69
NUP42P49686 YNL115CYNL115C 1935 nt10.74□□□□□ -0.69
NUP42P49686 TAF4YMR005W 1167 nt10.73□□□□□ -0.69
NUP42P49686 YML079WYML079W 606 nt10.72□□□□□ -0.69
NUP42P49686 COA2YPL189C-A 207 nt10.72□□□□□ -0.69
NUP42P49686 YDR306CYDR306C 1437 nt10.7□□□□□ -0.7
NUP42P49686 ALG7YBR243C 1347 nt10.69□□□□□ -0.7
NUP42P49686 YLR036CYLR036C 612 nt10.69□□□□□ -0.7
NUP42P49686 VAR1Q0140 1197 nt10.68□□□□□ -0.7
NUP42P49686 CWC25YNL245C 540 nt10.68□□□□□ -0.7
NUP42P49686 PKP1YIL042C 1185 nt10.67□□□□□ -0.7
NUP42P49686 OCA1YNL099C 717 nt10.67□□□□□ -0.7
NUP42P49686 YPR150WYPR150W 522 nt10.67□□□□□ -0.7
NUP42P49686 SUA5YGL169W 1281 nt10.66□□□□□ -0.7
NUP42P49686 MCM5YLR274W 2328 nt10.66□□□□□ -0.7
NUP42P49686 SCJ1YMR214W 1134 nt10.65□□□□□ -0.7
NUP42P49686 PRE2YPR103W 864 nt10.65□□□□□ -0.7
NUP42P49686 RPP1BYDL130W 321 nt10.64□□□□□ -0.71
NUP42P49686 SED5YLR026C 1023 nt10.64□□□□□ -0.71
NUP42P49686 YCR049CYCR049C 447 nt10.63□□□□□ -0.71
NUP42P49686 AQY1YPR192W 918 nt10.63□□□□□ -0.71
NUP42P49686 CTR1YPR124W 1221 nt10.62□□□□□ -0.71
NUP42P49686 YER147C-AYER147C-A 411 nt10.61□□□□□ -0.71
NUP42P49686 YLR460CYLR460C 1131 nt10.59□□□□□ -0.71
NUP42P49686 NDJ1YOL104C 1059 nt10.59□□□□□ -0.71
NUP42P49686 POA1YBR022W 534 nt10.57□□□□□ -0.72
NUP42P49686 MIX17YMR002W 471 nt10.56□□□□□ -0.72
NUP42P49686 YNL040WYNL040W 1371 nt10.55□□□□□ -0.72
NUP42P49686 LYS12YIL094C 1116 nt10.55□□□□□ -0.72
NUP42P49686 NPL6YMR091C 1308 nt10.54□□□□□ -0.72
NUP42P49686 ARE1YCR048W 1833 nt10.54□□□□□ -0.72
NUP42P49686 MPS2YGL075C 1164 nt10.53□□□□□ -0.72
NUP42P49686 UBC12YLR306W 567 nt10.52□□□□□ -0.73
NUP42P49686 DSE3YOR264W 1293 nt10.52□□□□□ -0.73
NUP42P49686 SVF1YDR346C 1446 nt10.51□□□□□ -0.73
NUP42P49686 tR(UCU)Q1tR(UCU)Q1 73 nt10.51□□□□□ -0.73
NUP42P49686 MRI1YPR118W 1236 nt10.51□□□□□ -0.73
NUP42P49686 STD1YOR047C 1335 nt10.51□□□□□ -0.73
NUP42P49686 YMR210WYMR210W 1350 nt10.51□□□□□ -0.73
NUP42P49686 PEX12YMR026C 1200 nt10.5□□□□□ -0.73
NUP42P49686 NUP57YGR119C 1626 nt10.49□□□□□ -0.73
NUP42P49686 YHR049C-AYHR049C-A 297 nt10.48□□□□□ -0.73
NUP42P49686 COX3Q0275 810 nt10.47□□□□□ -0.73
NUP42P49686 YLR311CYLR311C 348 nt10.47□□□□□ -0.73
NUP42P49686 TIF34YMR146C 1044 nt10.47□□□□□ -0.73
NUP42P49686 YMR114CYMR114C 1107 nt10.46□□□□□ -0.73
NUP42P49686 NEM1YHR004C 1341 nt10.46□□□□□ -0.73
NUP42P49686 ARC19YKL013C 516 nt10.45□□□□□ -0.74
NUP42P49686 BSC6YOL137W 1494 nt10.44□□□□□ -0.74
NUP42P49686 SAH1YER043C 1350 nt10.42□□□□□ -0.74
NUP42P49686 RAI1YGL246C 1164 nt10.42□□□□□ -0.74
NUP42P49686 KTR3YBR205W 1215 nt10.42□□□□□ -0.74
NUP42P49686 URN1YPR152C 1398 nt10.41□□□□□ -0.74
NUP42P49686 SSA4YER103W 1929 nt10.41□□□□□ -0.74
NUP42P49686 AME1YBR211C 975 nt10.41□□□□□ -0.74
NUP42P49686 AIR1YIL079C 1083 nt10.4□□□□□ -0.74
NUP42P49686 YHR145CYHR145C 357 nt10.39□□□□□ -0.75
NUP42P49686 YJR056CYJR056C 711 nt10.39□□□□□ -0.75
NUP42P49686 YMR074CYMR074C 438 nt10.39□□□□□ -0.75
NUP42P49686 ARP6YLR085C 1317 nt10.38□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms