RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C DRS1P32892 752 aaKnown RBP18■□□□□ 0.47
RRP1YDR087C MTC1P47018 478 aaKnown RBP17.87■□□□□ 0.45
RRP1YDR087C BFR2Q06631 534 aaKnown RBP15.61■□□□□ 0.09
RRP1YDR087C DIP2Q12220 943 aaPredicted RBP15.31■□□□□ 0.04
RRP1YDR087C AVT3P36062 692 aa15.2■□□□□ 0.02
RRP1YDR087C TFA1P36100 482 aa14.81□□□□□ -0.04
RRP1YDR087C FAP1P53971 965 aa14.45□□□□□ -0.1
RRP1YDR087C ISW2Q08773 1120 aa14.44□□□□□ -0.1
RRP1YDR087C RSE1Q04693 1361 aaKnown RBP14.4□□□□□ -0.1
RRP1YDR087C PRI1P10363 409 aa14.31□□□□□ -0.12
RRP1YDR087C RPG1P38249 964 aaKnown RBP14.31□□□□□ -0.12
RRP1YDR087C AAD16Q02895 342 aa14.02□□□□□ -0.17
RRP1YDR087C RPL17AP05740 184 aaKnown RBP13.88□□□□□ -0.19
RRP1YDR087C RPL17BP46990 184 aaKnown RBP13.88□□□□□ -0.19
RRP1YDR087C REB1P21538 810 aa13.63□□□□□ -0.23
RRP1YDR087C TSR3Q12094 313 aaKnown RBP13.59□□□□□ -0.23
RRP1YDR087C PRY3P47033 881 aa13.56□□□□□ -0.24
RRP1YDR087C SPT21P35209 758 aa13.45□□□□□ -0.26
RRP1YDR087C RIM101P33400 625 aa13.28□□□□□ -0.28
RRP1YDR087C YCK3P39962 524 aa13.04□□□□□ -0.32
RRP1YDR087C MRPL32P25348 183 aa12.99□□□□□ -0.33
RRP1YDR087C YKR023WP36119 530 aaKnown RBP12.99□□□□□ -0.33
RRP1YDR087C OXP1P28273 1286 aa12.9□□□□□ -0.34
RRP1YDR087C PTP3P40048 928 aa12.8□□□□□ -0.36
RRP1YDR087C HAA1Q12753 694 aaKnown RBP12.8□□□□□ -0.36
RRP1YDR087C CDC27P38042 758 aa12.69□□□□□ -0.38
RRP1YDR087C TFC8Q12308 588 aa12.69□□□□□ -0.38
RRP1YDR087C HOP09932 586 aa12.68□□□□□ -0.38
RRP1YDR087C SSP1P38871 571 aa12.68□□□□□ -0.38
RRP1YDR087C YAH1Q12184 172 aaKnown RBP12.62□□□□□ -0.39
RRP1YDR087C DCD1P06773 312 aa12.6□□□□□ -0.39
RRP1YDR087C YIL055CP40523 627 aaKnown RBP12.57□□□□□ -0.4
RRP1YDR087C YLR271WQ06152 274 aa12.52□□□□□ -0.41
RRP1YDR087C RQC2Q12532 1038 aaKnown RBP12.45□□□□□ -0.42
RRP1YDR087C RSM7P47150 247 aa12.44□□□□□ -0.42
RRP1YDR087C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
RRP1YDR087C BCH2P36122 765 aa12.34□□□□□ -0.43
RRP1YDR087C AI2P03876 854 aa12.22□□□□□ -0.45
RRP1YDR087C DMA1P38823 416 aa12.21□□□□□ -0.45
RRP1YDR087C MGA2P40578 1113 aa12.2□□□□□ -0.46
RRP1YDR087C PSD2P53037 1138 aaKnown RBP12.18□□□□□ -0.46
RRP1YDR087C CST9Q06032 482 aa12.15□□□□□ -0.46
RRP1YDR087C EPS1P40557 701 aa12.12□□□□□ -0.47
RRP1YDR087C MAP2P38174 421 aaKnown RBP12.1□□□□□ -0.47
RRP1YDR087C YGL015CP33199 130 aa12.09□□□□□ -0.47
RRP1YDR087C SCY1P53009 804 aa12.08□□□□□ -0.48
RRP1YDR087C UBP10P53874 792 aaPredicted RBP12.08□□□□□ -0.48
RRP1YDR087C BBC1P47068 1157 aa12.06□□□□□ -0.48
RRP1YDR087C BDF1P35817 686 aa12.03□□□□□ -0.48
RRP1YDR087C MRM1P25270 412 aa11.85□□□□□ -0.51
RRP1YDR087C SLX5P32828 619 aaKnown RBP11.82□□□□□ -0.52
RRP1YDR087C RCR1P38212 213 aa11.74□□□□□ -0.53
RRP1YDR087C RAM2P29703 316 aa11.73□□□□□ -0.53
RRP1YDR087C RTG3P38165 486 aa11.67□□□□□ -0.54
RRP1YDR087C VPS29P38759 282 aa11.62□□□□□ -0.55
RRP1YDR087C SAS10Q12136 610 aaPredicted RBP11.58□□□□□ -0.56
RRP1YDR087C TIF4632P39936 914 aaKnown RBP11.51□□□□□ -0.57
RRP1YDR087C TGL3P40308 642 aa11.51□□□□□ -0.57
RRP1YDR087C MAK11P20484 414 aaKnown RBP11.49□□□□□ -0.57
RRP1YDR087C SET1P38827 1080 aaKnown RBP11.45□□□□□ -0.58
RRP1YDR087C YMR1P47147 688 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
RRP1YDR087C STS1P38637 319 aa11.44□□□□□ -0.58
RRP1YDR087C NSR1P27476 414 aaKnown RBP RIP-Chip data11.43□□□□□ -0.58 RIP-Chip
RRP1YDR087C DBP1P24784 617 aaKnown RBP11.37□□□□□ -0.59
RRP1YDR087C YFR006WP43590 535 aa11.37□□□□□ -0.59
RRP1YDR087C YOR238WQ08634 303 aa11.37□□□□□ -0.59
RRP1YDR087C COQ8P27697 501 aa11.34□□□□□ -0.59
RRP1YDR087C YPR148CQ06523 435 aa11.34□□□□□ -0.59
RRP1YDR087C YAP5P40574 245 aa11.33□□□□□ -0.6
RRP1YDR087C EDS1P38073 919 aa11.29□□□□□ -0.6
RRP1YDR087C PIB1Q06651 286 aa11.27□□□□□ -0.61
RRP1YDR087C MST1P07236 462 aa11.23□□□□□ -0.61
RRP1YDR087C MIF2P35201 549 aa11.23□□□□□ -0.61
RRP1YDR087C VPS70P47161 811 aa11.23□□□□□ -0.61
RRP1YDR087C NOP53Q12080 455 aaKnown RBP11.23□□□□□ -0.61
RRP1YDR087C IFH1P39520 1085 aa11.22□□□□□ -0.61
RRP1YDR087C LEU3P08638 886 aa11.17□□□□□ -0.62
RRP1YDR087C VMA1P17255 1071 aaKnown RBP11.17□□□□□ -0.62
RRP1YDR087C PTC3P34221 468 aaKnown RBP11.15□□□□□ -0.62
RRP1YDR087C CKB1P43639 278 aa11.14□□□□□ -0.63
RRP1YDR087C LEO1P38439 464 aa11.08□□□□□ -0.64
RRP1YDR087C SAM3Q08986 587 aa11.08□□□□□ -0.64
RRP1YDR087C SPB4P25808 606 aaPredicted RBP11.01□□□□□ -0.65
RRP1YDR087C PBS2P08018 668 aa10.97□□□□□ -0.65
RRP1YDR087C DSF2P38213 736 aa10.97□□□□□ -0.65
RRP1YDR087C GTT3P39996 337 aa10.97□□□□□ -0.65
RRP1YDR087C GRE2Q12068 342 aaKnown RBP10.97□□□□□ -0.65
RRP1YDR087C REF2P42073 533 aaPredicted RBP10.96□□□□□ -0.65
RRP1YDR087C GUT1P32190 709 aa10.95□□□□□ -0.66
RRP1YDR087C ATH1P48016 1211 aa10.94□□□□□ -0.66
RRP1YDR087C GYP5Q12344 894 aa10.94□□□□□ -0.66
RRP1YDR087C YOL036WQ08206 761 aa10.92□□□□□ -0.66
RRP1YDR087C SOL3P38858 249 aa10.9□□□□□ -0.66
RRP1YDR087C UBP14P38237 781 aaKnown RBP10.86□□□□□ -0.67
RRP1YDR087C SET4P42948 560 aa10.86□□□□□ -0.67
RRP1YDR087C NST1P53935 1240 aa10.86□□□□□ -0.67
RRP1YDR087C YGR273CP53329 174 aa10.85□□□□□ -0.67
RRP1YDR087C RPN1P38764 993 aaKnown RBP10.84□□□□□ -0.67
RRP1YDR087C DCW1P36091 449 aa10.83□□□□□ -0.68
RRP1YDR087C VHR2P40041 505 aa10.83□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms