RNA–Protein interactions for RNA: YCL038C

ATG22, Transcript of Vacuolar integral membrane protein required for efflux of amino acids, yeastyeast

Gene ATG22, Length 1,587 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG22YCL038C DRS1P32892 752 aaKnown RBP17.25■□□□□ 0.35
ATG22YCL038C MTC1P47018 478 aaKnown RBP16.03■□□□□ 0.16
ATG22YCL038C BFR2Q06631 534 aaKnown RBP15.43■□□□□ 0.06
ATG22YCL038C TFA1P36100 482 aa15.32■□□□□ 0.04
ATG22YCL038C AVT3P36062 692 aa14.43□□□□□ -0.1
ATG22YCL038C DIP2Q12220 943 aaPredicted RBP14.3□□□□□ -0.12
ATG22YCL038C RQC2Q12532 1038 aaKnown RBP14.21□□□□□ -0.14
ATG22YCL038C RSE1Q04693 1361 aaKnown RBP13.17□□□□□ -0.3
ATG22YCL038C TAF7Q05021 590 aa13.08□□□□□ -0.32
ATG22YCL038C DMA1P38823 416 aa13.07□□□□□ -0.32
ATG22YCL038C ISW2Q08773 1120 aa12.77□□□□□ -0.37
ATG22YCL038C PTP3P40048 928 aa12.62□□□□□ -0.39
ATG22YCL038C RPL17AP05740 184 aaKnown RBP12.6□□□□□ -0.39
ATG22YCL038C RPL17BP46990 184 aaKnown RBP12.6□□□□□ -0.39
ATG22YCL038C RPG1P38249 964 aaKnown RBP12.56□□□□□ -0.4
ATG22YCL038C LEO1P38439 464 aa12.52□□□□□ -0.4
ATG22YCL038C REB1P21538 810 aa12.34□□□□□ -0.43
ATG22YCL038C RIM101P33400 625 aa12.33□□□□□ -0.44
ATG22YCL038C SSP1P38871 571 aa12.3□□□□□ -0.44
ATG22YCL038C SPT21P35209 758 aa12.25□□□□□ -0.45
ATG22YCL038C PRI1P10363 409 aa12.22□□□□□ -0.45
ATG22YCL038C LEU3P08638 886 aa12.06□□□□□ -0.48
ATG22YCL038C SAS10Q12136 610 aaPredicted RBP12.01□□□□□ -0.49
ATG22YCL038C OXP1P28273 1286 aa11.98□□□□□ -0.49
ATG22YCL038C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.98□□□□□ -0.49not detected
ATG22YCL038C YAH1Q12184 172 aaKnown RBP11.95□□□□□ -0.5
ATG22YCL038C YLR271WQ06152 274 aa11.86□□□□□ -0.51
ATG22YCL038C AAD16Q02895 342 aa11.84□□□□□ -0.51
ATG22YCL038C FAP1P53971 965 aa11.82□□□□□ -0.52
ATG22YCL038C YIL055CP40523 627 aaKnown RBP11.8□□□□□ -0.52
ATG22YCL038C MGA2P40578 1113 aa11.75□□□□□ -0.53
ATG22YCL038C TSR3Q12094 313 aaKnown RBP11.67□□□□□ -0.54
ATG22YCL038C RPN1P38764 993 aaKnown RBP11.62□□□□□ -0.55
ATG22YCL038C RSM7P47150 247 aa11.62□□□□□ -0.55
ATG22YCL038C DMA2P53924 522 aa11.59□□□□□ -0.55
ATG22YCL038C YKR023WP36119 530 aaKnown RBP11.58□□□□□ -0.55
ATG22YCL038C CST9Q06032 482 aa11.56□□□□□ -0.56
ATG22YCL038C PSD2P53037 1138 aaKnown RBP11.41□□□□□ -0.58
ATG22YCL038C SPB4P25808 606 aaPredicted RBP11.37□□□□□ -0.59
ATG22YCL038C TFC8Q12308 588 aa11.36□□□□□ -0.59
ATG22YCL038C HOP09932 586 aa11.35□□□□□ -0.59
ATG22YCL038C CKB1P43639 278 aa11.33□□□□□ -0.6
ATG22YCL038C RLF2Q12495 606 aa11.33□□□□□ -0.6
ATG22YCL038C AI2P03876 854 aa11.33□□□□□ -0.6
ATG22YCL038C ABP1P15891 592 aaKnown RBP11.31□□□□□ -0.6
ATG22YCL038C SET1P38827 1080 aaKnown RBP11.31□□□□□ -0.6
ATG22YCL038C RAM2P29703 316 aa11.29□□□□□ -0.6
ATG22YCL038C YPR148CQ06523 435 aa11.28□□□□□ -0.6
ATG22YCL038C VPS70P47161 811 aa11.27□□□□□ -0.61
ATG22YCL038C DCD1P06773 312 aa11.24□□□□□ -0.61
ATG22YCL038C IFH1P39520 1085 aa11.21□□□□□ -0.61
ATG22YCL038C MRPL32P25348 183 aa11.19□□□□□ -0.62
ATG22YCL038C BBC1P47068 1157 aa11.18□□□□□ -0.62
ATG22YCL038C DSF2P38213 736 aa11.11□□□□□ -0.63
ATG22YCL038C BCH2P36122 765 aa11.08□□□□□ -0.64
ATG22YCL038C RCR1P38212 213 aa11.07□□□□□ -0.64
ATG22YCL038C CDC27P38042 758 aa11.06□□□□□ -0.64
ATG22YCL038C KIN1P13185 1064 aa11.05□□□□□ -0.64
ATG22YCL038C PBS2P08018 668 aa11.04□□□□□ -0.64
ATG22YCL038C MRM1P25270 412 aa11.04□□□□□ -0.64
ATG22YCL038C YNR021WP53723 404 aaKnown RBP11.04□□□□□ -0.64
ATG22YCL038C MAK11P20484 414 aaKnown RBP11□□□□□ -0.65
ATG22YCL038C PRY3P47033 881 aa11□□□□□ -0.65
ATG22YCL038C RTG3P38165 486 aa10.97□□□□□ -0.65
ATG22YCL038C HGH1P48362 394 aaKnown RBP10.97□□□□□ -0.65
ATG22YCL038C EPS1P40557 701 aa10.96□□□□□ -0.65
ATG22YCL038C AIM7Q12156 149 aa10.93□□□□□ -0.66
ATG22YCL038C GLC3P32775 704 aa10.91□□□□□ -0.66
ATG22YCL038C MAM3Q12296 706 aa10.9□□□□□ -0.67
ATG22YCL038C BDF1P35817 686 aa10.86□□□□□ -0.67
ATG22YCL038C COQ8P27697 501 aa10.85□□□□□ -0.67
ATG22YCL038C IES2P40154 320 aa10.84□□□□□ -0.67
ATG22YCL038C DIT2P21595 489 aa10.81□□□□□ -0.68
ATG22YCL038C GUA1P38625 525 aaKnown RBP10.81□□□□□ -0.68
ATG22YCL038C REF2P42073 533 aaPredicted RBP10.81□□□□□ -0.68
ATG22YCL038C NUP42P49686 430 aaKnown RBP10.81□□□□□ -0.68
ATG22YCL038C NOP53Q12080 455 aaKnown RBP10.81□□□□□ -0.68
ATG22YCL038C VPS29P38759 282 aa10.76□□□□□ -0.69
ATG22YCL038C MAK21Q12176 1025 aaKnown RBP10.76□□□□□ -0.69
ATG22YCL038C ATF2P53296 535 aa10.7□□□□□ -0.7
ATG22YCL038C HPC2Q01448 625 aa10.7□□□□□ -0.7
ATG22YCL038C MIF2P35201 549 aa10.67□□□□□ -0.7
ATG22YCL038C COX6P00427 148 aa10.66□□□□□ -0.7
ATG22YCL038C SCY1P53009 804 aa10.65□□□□□ -0.7
ATG22YCL038C EDS1P38073 919 aa10.65□□□□□ -0.71
ATG22YCL038C TFB3Q03290 321 aa10.63□□□□□ -0.71
ATG22YCL038C YML020WQ03722 664 aa10.63□□□□□ -0.71
ATG22YCL038C YMR1P47147 688 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
ATG22YCL038C STS1P38637 319 aa10.58□□□□□ -0.72
ATG22YCL038C SSA1P10591 642 aaKnown RBP10.56□□□□□ -0.72
ATG22YCL038C BRL1P38770 471 aa10.56□□□□□ -0.72
ATG22YCL038C NOP8Q08287 484 aaPredicted RBP10.56□□□□□ -0.72
ATG22YCL038C GEF1P37020 779 aa10.53□□□□□ -0.72
ATG22YCL038C SLX8P40072 274 aa10.52□□□□□ -0.72
ATG22YCL038C SUB2Q07478 446 aaKnown RBP10.52□□□□□ -0.72
ATG22YCL038C DBP1P24784 617 aaKnown RBP10.51□□□□□ -0.73
ATG22YCL038C PTC3P34221 468 aaKnown RBP10.51□□□□□ -0.73
ATG22YCL038C PKC1P24583 1151 aa10.5□□□□□ -0.73
ATG22YCL038C YFR006WP43590 535 aa10.49□□□□□ -0.73
ATG22YCL038C SSA2P10592 639 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms