RNA–Protein interactions for RNA: YNL009W

IDP3, Transcript of Peroxisomal NADP-dependent isocitrate dehydrogenase, yeastyeast

Gene IDP3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IDP3YNL009W MTC1P47018 478 aaKnown RBP17.81■□□□□ 0.44
IDP3YNL009W DRS1P32892 752 aaKnown RBP17.33■□□□□ 0.36
IDP3YNL009W FAP1P53971 965 aa15.96■□□□□ 0.15
IDP3YNL009W BFR2Q06631 534 aaKnown RBP15.52■□□□□ 0.08
IDP3YNL009W TFA1P36100 482 aa15.31■□□□□ 0.04
IDP3YNL009W PRI1P10363 409 aa15□□□□□ -0.01
IDP3YNL009W PRY3P47033 881 aa14.99□□□□□ -0.01
IDP3YNL009W AAD16Q02895 342 aa14.92□□□□□ -0.02
IDP3YNL009W ISW2Q08773 1120 aa14.79□□□□□ -0.04
IDP3YNL009W DIP2Q12220 943 aaPredicted RBP14.61□□□□□ -0.07
IDP3YNL009W RPG1P38249 964 aaKnown RBP14.59□□□□□ -0.07
IDP3YNL009W AVT3P36062 692 aa14.41□□□□□ -0.1
IDP3YNL009W RQC2Q12532 1038 aaKnown RBP14.35□□□□□ -0.11
IDP3YNL009W TSR3Q12094 313 aaKnown RBP14.14□□□□□ -0.15
IDP3YNL009W HAA1Q12753 694 aaKnown RBP14.14□□□□□ -0.15
IDP3YNL009W RSE1Q04693 1361 aaKnown RBP14.13□□□□□ -0.15
IDP3YNL009W YCK3P39962 524 aa14.1□□□□□ -0.15
IDP3YNL009W RPL17AP05740 184 aaKnown RBP13.65□□□□□ -0.22
IDP3YNL009W MRPL32P25348 183 aa13.65□□□□□ -0.22
IDP3YNL009W RPL17BP46990 184 aaKnown RBP13.65□□□□□ -0.22
IDP3YNL009W REB1P21538 810 aa13.6□□□□□ -0.23
IDP3YNL009W YGL015CP33199 130 aa13.1□□□□□ -0.31
IDP3YNL009W DMA1P38823 416 aa13.08□□□□□ -0.32
IDP3YNL009W TAF7Q05021 590 aa13.07□□□□□ -0.32
IDP3YNL009W SPT21P35209 758 aa13.05□□□□□ -0.32
IDP3YNL009W CDC27P38042 758 aa12.91□□□□□ -0.34
IDP3YNL009W YKR023WP36119 530 aaKnown RBP12.9□□□□□ -0.34
IDP3YNL009W PTP3P40048 928 aa12.69□□□□□ -0.38
IDP3YNL009W TFC8Q12308 588 aa12.66□□□□□ -0.38
IDP3YNL009W RIM101P33400 625 aa12.64□□□□□ -0.39
IDP3YNL009W HOP09932 586 aa12.62□□□□□ -0.39
IDP3YNL009W UBP10P53874 792 aaPredicted RBP12.61□□□□□ -0.39
IDP3YNL009W DCD1P06773 312 aa12.52□□□□□ -0.41
IDP3YNL009W MAP2P38174 421 aaKnown RBP12.51□□□□□ -0.41
IDP3YNL009W LEO1P38439 464 aa12.5□□□□□ -0.41
IDP3YNL009W SSP1P38871 571 aa12.32□□□□□ -0.44
IDP3YNL009W SCY1P53009 804 aa12.28□□□□□ -0.44
IDP3YNL009W BCH2P36122 765 aa12.23□□□□□ -0.45
IDP3YNL009W OXP1P28273 1286 aa12.18□□□□□ -0.46
IDP3YNL009W SLX5P32828 619 aaKnown RBP12.15□□□□□ -0.46
IDP3YNL009W TIF4632P39936 914 aaKnown RBP12.13□□□□□ -0.47
IDP3YNL009W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.08□□□□□ -0.48not detected
IDP3YNL009W TGL3P40308 642 aa12.07□□□□□ -0.48
IDP3YNL009W YIL055CP40523 627 aaKnown RBP12.06□□□□□ -0.48
IDP3YNL009W LEU3P08638 886 aa12.03□□□□□ -0.48
IDP3YNL009W YAH1Q12184 172 aaKnown RBP12.02□□□□□ -0.49
IDP3YNL009W BUD31P25337 157 aaPredicted RBP11.96□□□□□ -0.49
IDP3YNL009W SAS10Q12136 610 aaPredicted RBP11.95□□□□□ -0.5
IDP3YNL009W EPS1P40557 701 aa11.94□□□□□ -0.5
IDP3YNL009W BDF1P35817 686 aa11.88□□□□□ -0.51
IDP3YNL009W RSM7P47150 247 aa11.88□□□□□ -0.51
IDP3YNL009W YLR271WQ06152 274 aa11.84□□□□□ -0.51
IDP3YNL009W BBC1P47068 1157 aa11.79□□□□□ -0.52
IDP3YNL009W MGA2P40578 1113 aa11.77□□□□□ -0.53
IDP3YNL009W AI2P03876 854 aa11.75□□□□□ -0.53
IDP3YNL009W UBP9P39967 754 aa11.7□□□□□ -0.54
IDP3YNL009W RPN1P38764 993 aaKnown RBP11.65□□□□□ -0.54
IDP3YNL009W DMA2P53924 522 aa11.57□□□□□ -0.56
IDP3YNL009W NSR1P27476 414 aaKnown RBP RIP-Chip data11.56□□□□□ -0.56not detected
IDP3YNL009W MST1P07236 462 aa11.55□□□□□ -0.56
IDP3YNL009W CST9Q06032 482 aa11.54□□□□□ -0.56
IDP3YNL009W YOR238WQ08634 303 aa11.53□□□□□ -0.56
IDP3YNL009W PSD2P53037 1138 aaKnown RBP11.49□□□□□ -0.57
IDP3YNL009W YAP5P40574 245 aa11.46□□□□□ -0.57
IDP3YNL009W SPB4P25808 606 aaPredicted RBP11.44□□□□□ -0.58
IDP3YNL009W SIS1P25294 352 aaKnown RBP11.4□□□□□ -0.58
IDP3YNL009W CKB1P43639 278 aa11.37□□□□□ -0.59
IDP3YNL009W SET1P38827 1080 aaKnown RBP11.33□□□□□ -0.6
IDP3YNL009W RLF2Q12495 606 aa11.33□□□□□ -0.6
IDP3YNL009W VPS70P47161 811 aa11.31□□□□□ -0.6
IDP3YNL009W MRM1P25270 412 aa11.3□□□□□ -0.6
IDP3YNL009W YBL029C-AQ3E756 94 aa11.3□□□□□ -0.6
IDP3YNL009W IFH1P39520 1085 aa11.27□□□□□ -0.61
IDP3YNL009W RAM2P29703 316 aa11.26□□□□□ -0.61
IDP3YNL009W YPR148CQ06523 435 aa11.25□□□□□ -0.61
IDP3YNL009W VNX1P42839 908 aa11.22□□□□□ -0.61
IDP3YNL009W GTT3P39996 337 aa11.19□□□□□ -0.62
IDP3YNL009W ABP1P15891 592 aaKnown RBP11.18□□□□□ -0.62
IDP3YNL009W WSC3Q12215 556 aa11.15□□□□□ -0.62
IDP3YNL009W SPP1Q03012 353 aa11.13□□□□□ -0.63
IDP3YNL009W RTG3P38165 486 aa11.12□□□□□ -0.63
IDP3YNL009W HGH1P48362 394 aaKnown RBP11.1□□□□□ -0.63
IDP3YNL009W PIB1Q06651 286 aa11.09□□□□□ -0.63
IDP3YNL009W DSF2P38213 736 aa11.08□□□□□ -0.64
IDP3YNL009W YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
IDP3YNL009W PBS2P08018 668 aa11.06□□□□□ -0.64
IDP3YNL009W KIN1P13185 1064 aa11.06□□□□□ -0.64
IDP3YNL009W VPS29P38759 282 aa11.06□□□□□ -0.64
IDP3YNL009W YNR021WP53723 404 aaKnown RBP11.05□□□□□ -0.64
IDP3YNL009W TIF11P38912 153 aaKnown RBP11.04□□□□□ -0.64
IDP3YNL009W RCR1P38212 213 aa11.03□□□□□ -0.64
IDP3YNL009W MAK11P20484 414 aaKnown RBP11.02□□□□□ -0.65
IDP3YNL009W DBP1P24784 617 aaKnown RBP11.01□□□□□ -0.65
IDP3YNL009W MSB4Q12317 492 aa10.95□□□□□ -0.66
IDP3YNL009W GLC3P32775 704 aa10.94□□□□□ -0.66
IDP3YNL009W MAM3Q12296 706 aa10.94□□□□□ -0.66
IDP3YNL009W STS1P38637 319 aa10.93□□□□□ -0.66
IDP3YNL009W YFR006WP43590 535 aa10.93□□□□□ -0.66
IDP3YNL009W ULI1P43604 169 aa10.92□□□□□ -0.66
IDP3YNL009W AIM7Q12156 149 aa10.92□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms