RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W DRS1P32892 752 aaKnown RBP17.74■□□□□ 0.43
PRE2YPR103W MTC1P47018 478 aaKnown RBP17.47■□□□□ 0.39
PRE2YPR103W BFR2Q06631 534 aaKnown RBP15.42■□□□□ 0.06
PRE2YPR103W DIP2Q12220 943 aaPredicted RBP15.04■□□□□ -0
PRE2YPR103W AVT3P36062 692 aa14.95□□□□□ -0.02
PRE2YPR103W TFA1P36100 482 aa14.7□□□□□ -0.06
PRE2YPR103W RSE1Q04693 1361 aaKnown RBP14.11□□□□□ -0.15
PRE2YPR103W ISW2Q08773 1120 aa14.09□□□□□ -0.15
PRE2YPR103W FAP1P53971 965 aa14.01□□□□□ -0.17
PRE2YPR103W RPG1P38249 964 aaKnown RBP13.96□□□□□ -0.17
PRE2YPR103W PRI1P10363 409 aa13.92□□□□□ -0.18
PRE2YPR103W AAD16Q02895 342 aa13.62□□□□□ -0.23
PRE2YPR103W RPL17AP05740 184 aaKnown RBP13.6□□□□□ -0.23
PRE2YPR103W RPL17BP46990 184 aaKnown RBP13.6□□□□□ -0.23
PRE2YPR103W REB1P21538 810 aa13.34□□□□□ -0.27
PRE2YPR103W TSR3Q12094 313 aaKnown RBP13.25□□□□□ -0.29
PRE2YPR103W SPT21P35209 758 aa13.17□□□□□ -0.3
PRE2YPR103W PRY3P47033 881 aa13.14□□□□□ -0.31
PRE2YPR103W RIM101P33400 625 aa13.03□□□□□ -0.32
PRE2YPR103W YKR023WP36119 530 aaKnown RBP12.7□□□□□ -0.38
PRE2YPR103W OXP1P28273 1286 aa12.66□□□□□ -0.38
PRE2YPR103W PTP3P40048 928 aa12.66□□□□□ -0.38
PRE2YPR103W MRPL32P25348 183 aa12.65□□□□□ -0.38
PRE2YPR103W YCK3P39962 524 aa12.62□□□□□ -0.39
PRE2YPR103W SSP1P38871 571 aa12.5□□□□□ -0.41
PRE2YPR103W RQC2Q12532 1038 aaKnown RBP12.48□□□□□ -0.41
PRE2YPR103W YAH1Q12184 172 aaKnown RBP12.43□□□□□ -0.42
PRE2YPR103W HOP09932 586 aa12.42□□□□□ -0.42
PRE2YPR103W TFC8Q12308 588 aa12.41□□□□□ -0.42
PRE2YPR103W HAA1Q12753 694 aaKnown RBP12.39□□□□□ -0.43
PRE2YPR103W CDC27P38042 758 aa12.38□□□□□ -0.43
PRE2YPR103W YIL055CP40523 627 aaKnown RBP12.35□□□□□ -0.43
PRE2YPR103W DCD1P06773 312 aa12.34□□□□□ -0.43
PRE2YPR103W YLR271WQ06152 274 aa12.33□□□□□ -0.44
PRE2YPR103W RSM7P47150 247 aa12.22□□□□□ -0.45
PRE2YPR103W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
PRE2YPR103W DMA1P38823 416 aa12.19□□□□□ -0.46
PRE2YPR103W BCH2P36122 765 aa12.07□□□□□ -0.48
PRE2YPR103W MGA2P40578 1113 aa12.01□□□□□ -0.49
PRE2YPR103W AI2P03876 854 aa11.99□□□□□ -0.49
PRE2YPR103W CST9Q06032 482 aa11.97□□□□□ -0.49
PRE2YPR103W PSD2P53037 1138 aaKnown RBP11.96□□□□□ -0.49
PRE2YPR103W EPS1P40557 701 aa11.86□□□□□ -0.51
PRE2YPR103W BBC1P47068 1157 aa11.83□□□□□ -0.52
PRE2YPR103W SCY1P53009 804 aa11.8□□□□□ -0.52
PRE2YPR103W MAP2P38174 421 aaKnown RBP11.79□□□□□ -0.52
PRE2YPR103W BDF1P35817 686 aa11.78□□□□□ -0.52
PRE2YPR103W UBP10P53874 792 aaPredicted RBP11.75□□□□□ -0.53
PRE2YPR103W YGL015CP33199 130 aa11.73□□□□□ -0.53
PRE2YPR103W MRM1P25270 412 aa11.64□□□□□ -0.55
PRE2YPR103W RAM2P29703 316 aa11.56□□□□□ -0.56
PRE2YPR103W RCR1P38212 213 aa11.56□□□□□ -0.56
PRE2YPR103W SLX5P32828 619 aaKnown RBP11.53□□□□□ -0.56
PRE2YPR103W SAS10Q12136 610 aaPredicted RBP11.49□□□□□ -0.57
PRE2YPR103W RTG3P38165 486 aa11.46□□□□□ -0.57
PRE2YPR103W VPS29P38759 282 aa11.4□□□□□ -0.58
PRE2YPR103W MAK11P20484 414 aaKnown RBP11.3□□□□□ -0.6
PRE2YPR103W SET1P38827 1080 aaKnown RBP11.3□□□□□ -0.6
PRE2YPR103W STS1P38637 319 aa11.22□□□□□ -0.61
PRE2YPR103W YMR1P47147 688 aaKnown RBP RIP-Chip data11.22□□□□□ -0.61not detected
PRE2YPR103W TIF4632P39936 914 aaKnown RBP11.2□□□□□ -0.62
PRE2YPR103W TGL3P40308 642 aa11.19□□□□□ -0.62
PRE2YPR103W YPR148CQ06523 435 aa11.19□□□□□ -0.62
PRE2YPR103W COQ8P27697 501 aa11.17□□□□□ -0.62
PRE2YPR103W YFR006WP43590 535 aa11.17□□□□□ -0.62
PRE2YPR103W DBP1P24784 617 aaKnown RBP11.16□□□□□ -0.62
PRE2YPR103W YOR238WQ08634 303 aa11.14□□□□□ -0.63
PRE2YPR103W LEU3P08638 886 aa11.13□□□□□ -0.63
PRE2YPR103W NSR1P27476 414 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
PRE2YPR103W VPS70P47161 811 aa11.12□□□□□ -0.63
PRE2YPR103W EDS1P38073 919 aa11.11□□□□□ -0.63
PRE2YPR103W LEO1P38439 464 aa11.11□□□□□ -0.63
PRE2YPR103W IFH1P39520 1085 aa11.07□□□□□ -0.64
PRE2YPR103W MIF2P35201 549 aa11.06□□□□□ -0.64
PRE2YPR103W YAP5P40574 245 aa11.06□□□□□ -0.64
PRE2YPR103W PIB1Q06651 286 aa11.06□□□□□ -0.64
PRE2YPR103W NOP53Q12080 455 aaKnown RBP11.03□□□□□ -0.64
PRE2YPR103W CKB1P43639 278 aa11.02□□□□□ -0.65
PRE2YPR103W PTC3P34221 468 aaKnown RBP10.96□□□□□ -0.65
PRE2YPR103W VMA1P17255 1071 aaKnown RBP10.94□□□□□ -0.66
PRE2YPR103W SPB4P25808 606 aaPredicted RBP10.94□□□□□ -0.66
PRE2YPR103W MST1P07236 462 aa10.93□□□□□ -0.66
PRE2YPR103W PBS2P08018 668 aa10.86□□□□□ -0.67
PRE2YPR103W DSF2P38213 736 aa10.85□□□□□ -0.67
PRE2YPR103W SAM3Q08986 587 aa10.83□□□□□ -0.68
PRE2YPR103W REF2P42073 533 aaPredicted RBP10.82□□□□□ -0.68
PRE2YPR103W RPN1P38764 993 aaKnown RBP10.8□□□□□ -0.68
PRE2YPR103W GRE2Q12068 342 aaKnown RBP10.76□□□□□ -0.69
PRE2YPR103W GUT1P32190 709 aa10.74□□□□□ -0.69
PRE2YPR103W ATH1P48016 1211 aa10.74□□□□□ -0.69
PRE2YPR103W TAF7Q05021 590 aa10.73□□□□□ -0.69
PRE2YPR103W GTT3P39996 337 aa10.72□□□□□ -0.69
PRE2YPR103W GYP5Q12344 894 aa10.71□□□□□ -0.69
PRE2YPR103W SOL3P38858 249 aa10.7□□□□□ -0.7
PRE2YPR103W UBP14P38237 781 aaKnown RBP10.69□□□□□ -0.7
PRE2YPR103W MAM3Q12296 706 aa10.69□□□□□ -0.7
PRE2YPR103W VHR2P40041 505 aa10.68□□□□□ -0.7
PRE2YPR103W YOL036WQ08206 761 aa10.68□□□□□ -0.7
PRE2YPR103W COX6P00427 148 aa10.67□□□□□ -0.7
PRE2YPR103W IES2P40154 320 aa10.67□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms