RNA–Protein interactions for RNA: YOR243C

PUS7, Transcript of Pseudouridine synthase, yeast

Gene PUS7, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS7	YOR243C	DRS1	P32892	752 aa	Known RBP	16.51	■□□□□ 0.23
PUS7	YOR243C	TFA1	P36100	482 aa		15.52	■□□□□ 0.08
PUS7	YOR243C	BFR2	Q06631	534 aa	Known RBP	15.07	■□□□□ 0
PUS7	YOR243C	RQC2	Q12532	1038 aa	Known RBP	14.88	□□□□□ -0.03
PUS7	YOR243C	MTC1	P47018	478 aa	Known RBP	14.68	□□□□□ -0.06
PUS7	YOR243C	TAF7	Q05021	590 aa		14.51	□□□□□ -0.09
PUS7	YOR243C	AVT3	P36062	692 aa		13.87	□□□□□ -0.19
PUS7	YOR243C	DIP2	Q12220	943 aa	Predicted RBP	13.46	□□□□□ -0.25
PUS7	YOR243C	DMA1	P38823	416 aa		13.45	□□□□□ -0.26
PUS7	YOR243C	LEO1	P38439	464 aa		13.28	□□□□□ -0.28
PUS7	YOR243C	LEU3	P08638	886 aa		12.5	□□□□□ -0.41
PUS7	YOR243C	PTP3	P40048	928 aa		12.3	□□□□□ -0.44
PUS7	YOR243C	FAP1	P53971	965 aa		12.3	□□□□□ -0.44
PUS7	YOR243C	SAS10	Q12136	610 aa	Predicted RBP	12.25	□□□□□ -0.45
PUS7	YOR243C	DMA2	P53924	522 aa		12.18	□□□□□ -0.46
PUS7	YOR243C	RSE1	Q04693	1361 aa	Known RBP	12.16	□□□□□ -0.46
PUS7	YOR243C	ABP1	P15891	592 aa	Known RBP	12.15	□□□□□ -0.47
PUS7	YOR243C	IFH1	P39520	1085 aa		12.09	□□□□□ -0.47
PUS7	YOR243C	NAP1	P25293	417 aa	Known RBP	11.99	□□□□□ -0.49
PUS7	YOR243C	RLF2	Q12495	606 aa		11.98	□□□□□ -0.49
PUS7	YOR243C	RPN1	P38764	993 aa	Known RBP	11.94	□□□□□ -0.5
PUS7	YOR243C	AIM44	Q99299	758 aa		11.94	□□□□□ -0.5
PUS7	YOR243C	SSP1	P38871	571 aa		11.89	□□□□□ -0.51
PUS7	YOR243C	IOC4	Q04213	475 aa		11.88	□□□□□ -0.51
PUS7	YOR243C	ORC1	P54784	914 aa	Predicted RBP	11.8	□□□□□ -0.52
PUS7	YOR243C	CKB1	P43639	278 aa		11.67	□□□□□ -0.54
PUS7	YOR243C	PRI1	P10363	409 aa		11.66	□□□□□ -0.54
PUS7	YOR243C	RIM101	P33400	625 aa		11.65	□□□□□ -0.54
PUS7	YOR243C	PRY3	P47033	881 aa		11.6	□□□□□ -0.55
PUS7	YOR243C	RPL17A	P05740	184 aa	Known RBP	11.59	□□□□□ -0.55
PUS7	YOR243C	RPL17B	P46990	184 aa	Known RBP	11.59	□□□□□ -0.55
PUS7	YOR243C	AAD16	Q02895	342 aa		11.52	□□□□□ -0.56
PUS7	YOR243C	URN1	Q06525	465 aa	Known RBP	11.5	□□□□□ -0.57
PUS7	YOR243C	SPT21	P35209	758 aa		11.45	□□□□□ -0.58
PUS7	YOR243C	YML020W	Q03722	664 aa		11.45	□□□□□ -0.58
PUS7	YOR243C	NOP8	Q08287	484 aa	Predicted RBP	11.45	□□□□□ -0.58
PUS7	YOR243C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
PUS7	YOR243C	ISW2	Q08773	1120 aa		11.43	□□□□□ -0.58
PUS7	YOR243C	OXP1	P28273	1286 aa		11.36	□□□□□ -0.59
PUS7	YOR243C	YLR271W	Q06152	274 aa		11.36	□□□□□ -0.59
PUS7	YOR243C	RPG1	P38249	964 aa	Known RBP	11.35	□□□□□ -0.59
PUS7	YOR243C	SPB4	P25808	606 aa	Predicted RBP	11.33	□□□□□ -0.6
PUS7	YOR243C	YAH1	Q12184	172 aa	Known RBP	11.31	□□□□□ -0.6
PUS7	YOR243C	MGA2	P40578	1113 aa		11.29	□□□□□ -0.6
PUS7	YOR243C	REB1	P21538	810 aa		11.23	□□□□□ -0.61
PUS7	YOR243C	KIN1	P13185	1064 aa		11.22	□□□□□ -0.61
PUS7	YOR243C	SLX8	P40072	274 aa		11.22	□□□□□ -0.61
PUS7	YOR243C	YPR148C	Q06523	435 aa		11.2	□□□□□ -0.62
PUS7	YOR243C	TOP1	P04786	769 aa		11.19	□□□□□ -0.62
PUS7	YOR243C	HGH1	P48362	394 aa	Known RBP	11.15	□□□□□ -0.62
PUS7	YOR243C	YCK3	P39962	524 aa		11.14	□□□□□ -0.63
PUS7	YOR243C	GEF1	P37020	779 aa		11.12	□□□□□ -0.63
PUS7	YOR243C	VPS70	P47161	811 aa		11.12	□□□□□ -0.63
PUS7	YOR243C	DSF2	P38213	736 aa		11.11	□□□□□ -0.63
PUS7	YOR243C	CST9	Q06032	482 aa		11.11	□□□□□ -0.63
PUS7	YOR243C	SSA1	P10591	642 aa	Known RBP	11.11	□□□□□ -0.63
PUS7	YOR243C	YNR021W	P53723	404 aa	Known RBP	11.11	□□□□□ -0.63
PUS7	YOR243C	NOP7	P53261	605 aa	Known RBP	11.09	□□□□□ -0.63
PUS7	YOR243C	YRB30	P53107	440 aa	Predicted RBP	11.08	□□□□□ -0.64
PUS7	YOR243C	SET1	P38827	1080 aa	Known RBP	11.07	□□□□□ -0.64
PUS7	YOR243C	SNU71	P53207	620 aa	Known RBP	11.06	□□□□□ -0.64
PUS7	YOR243C	MAM3	Q12296	706 aa		11.04	□□□□□ -0.64
PUS7	YOR243C	YIL055C	P40523	627 aa	Known RBP	11.03	□□□□□ -0.64
PUS7	YOR243C	MRX12	P47084	519 aa		11.03	□□□□□ -0.64
PUS7	YOR243C	TSR3	Q12094	313 aa	Known RBP	11.02	□□□□□ -0.64
PUS7	YOR243C	SUB2	Q07478	446 aa	Known RBP	11.02	□□□□□ -0.65
PUS7	YOR243C	AIM7	Q12156	149 aa		11.02	□□□□□ -0.65
PUS7	YOR243C	GUA1	P38625	525 aa	Known RBP	10.99	□□□□□ -0.65
PUS7	YOR243C	GLC3	P32775	704 aa		10.96	□□□□□ -0.65
PUS7	YOR243C	RAM2	P29703	316 aa		10.95	□□□□□ -0.66
PUS7	YOR243C	PBS2	P08018	668 aa		10.94	□□□□□ -0.66
PUS7	YOR243C	PAM1	P37304	830 aa	Known RBP	10.93	□□□□□ -0.66
PUS7	YOR243C	BRL1	P38770	471 aa		10.93	□□□□□ -0.66
PUS7	YOR243C	RSM7	P47150	247 aa		10.92	□□□□□ -0.66
PUS7	YOR243C	PSD2	P53037	1138 aa	Known RBP	10.87	□□□□□ -0.67
PUS7	YOR243C	HPC2	Q01448	625 aa		10.87	□□□□□ -0.67
PUS7	YOR243C	MET10	P39692	1035 aa		10.85	□□□□□ -0.67
PUS7	YOR243C	ATG36	P46983	293 aa		10.84	□□□□□ -0.67
PUS7	YOR243C	HAA1	Q12753	694 aa	Known RBP	10.84	□□□□□ -0.67
PUS7	YOR243C	YTA7	P40340	1379 aa		10.83	□□□□□ -0.68
PUS7	YOR243C	SLD2	P34252	453 aa		10.8	□□□□□ -0.68
PUS7	YOR243C	DOS2	P54858	310 aa		10.8	□□□□□ -0.68
PUS7	YOR243C	TFB3	Q03290	321 aa		10.8	□□□□□ -0.68
PUS7	YOR243C	BRN1	P38170	754 aa		10.8	□□□□□ -0.68
PUS7	YOR243C	FAR11	P53917	953 aa		10.8	□□□□□ -0.68
PUS7	YOR243C	NUP42	P49686	430 aa	Known RBP	10.79	□□□□□ -0.68
PUS7	YOR243C	SPC42	P36094	363 aa		10.78	□□□□□ -0.68
PUS7	YOR243C	DIT2	P21595	489 aa		10.77	□□□□□ -0.68
PUS7	YOR243C	RRN6	P32786	894 aa		10.77	□□□□□ -0.69
PUS7	YOR243C	SWE1	P32944	819 aa		10.77	□□□□□ -0.69
PUS7	YOR243C	NUG1	P40010	520 aa	Known RBP	10.77	□□□□□ -0.69
PUS7	YOR243C	LAM6	Q08001	693 aa		10.75	□□□□□ -0.69
PUS7	YOR243C	IES2	P40154	320 aa		10.74	□□□□□ -0.69
PUS7	YOR243C	MAK21	Q12176	1025 aa	Known RBP	10.74	□□□□□ -0.69
PUS7	YOR243C	SEN54	Q02825	467 aa	Predicted RBP	10.72	□□□□□ -0.69
PUS7	YOR243C	OCA5	P38738	679 aa		10.71	□□□□□ -0.69
PUS7	YOR243C	SSA4	P22202	642 aa	Known RBP	10.69	□□□□□ -0.7
PUS7	YOR243C	PKC1	P24583	1151 aa		10.68	□□□□□ -0.7
PUS7	YOR243C	GLN1	P32288	370 aa	Known RBP	10.68	□□□□□ -0.7
PUS7	YOR243C	HEM3	P28789	327 aa		10.67	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms