RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C MTC1P47018 478 aaKnown RBP19.33■□□□□ 0.68
SED5YLR026C DRS1P32892 752 aaKnown RBP18.7■□□□□ 0.58
SED5YLR026C FAP1P53971 965 aa16.79■□□□□ 0.28
SED5YLR026C DIP2Q12220 943 aaPredicted RBP16.17■□□□□ 0.18
SED5YLR026C PRI1P10363 409 aa15.97■□□□□ 0.15
SED5YLR026C ISW2Q08773 1120 aa15.89■□□□□ 0.13
SED5YLR026C BFR2Q06631 534 aaKnown RBP15.83■□□□□ 0.12
SED5YLR026C AAD16Q02895 342 aa15.8■□□□□ 0.12
SED5YLR026C RPG1P38249 964 aaKnown RBP15.76■□□□□ 0.11
SED5YLR026C PRY3P47033 881 aa15.76■□□□□ 0.11
SED5YLR026C AVT3P36062 692 aa15.73■□□□□ 0.11
SED5YLR026C RSE1Q04693 1361 aaKnown RBP15.45■□□□□ 0.06
SED5YLR026C TSR3Q12094 313 aaKnown RBP15.19■□□□□ 0.02
SED5YLR026C RPL17AP05740 184 aaKnown RBP14.96□□□□□ -0.01
SED5YLR026C RPL17BP46990 184 aaKnown RBP14.96□□□□□ -0.01
SED5YLR026C YCK3P39962 524 aa14.9□□□□□ -0.02
SED5YLR026C REB1P21538 810 aa14.82□□□□□ -0.04
SED5YLR026C HAA1Q12753 694 aaKnown RBP14.75□□□□□ -0.05
SED5YLR026C MRPL32P25348 183 aa14.54□□□□□ -0.08
SED5YLR026C TFA1P36100 482 aa14.32□□□□□ -0.12
SED5YLR026C SPT21P35209 758 aa14.31□□□□□ -0.12
SED5YLR026C YKR023WP36119 530 aaKnown RBP14.05□□□□□ -0.16
SED5YLR026C CDC27P38042 758 aa13.96□□□□□ -0.17
SED5YLR026C RIM101P33400 625 aa13.94□□□□□ -0.18
SED5YLR026C HOP09932 586 aa13.8□□□□□ -0.2
SED5YLR026C DCD1P06773 312 aa13.75□□□□□ -0.21
SED5YLR026C YGL015CP33199 130 aa13.75□□□□□ -0.21
SED5YLR026C TFC8Q12308 588 aa13.74□□□□□ -0.21
SED5YLR026C OXP1P28273 1286 aa13.53□□□□□ -0.24
SED5YLR026C MAP2P38174 421 aaKnown RBP13.45□□□□□ -0.26
SED5YLR026C UBP10P53874 792 aaPredicted RBP13.39□□□□□ -0.27
SED5YLR026C BCH2P36122 765 aa13.34□□□□□ -0.27
SED5YLR026C YIL055CP40523 627 aaKnown RBP13.32□□□□□ -0.28
SED5YLR026C PTP3P40048 928 aa13.31□□□□□ -0.28
SED5YLR026C SCY1P53009 804 aa13.3□□□□□ -0.28
SED5YLR026C YAH1Q12184 172 aaKnown RBP13.26□□□□□ -0.29
SED5YLR026C RSM7P47150 247 aa13.11□□□□□ -0.31
SED5YLR026C SLX5P32828 619 aaKnown RBP13.05□□□□□ -0.32
SED5YLR026C EPS1P40557 701 aa13.05□□□□□ -0.32
SED5YLR026C YLR271WQ06152 274 aa13.02□□□□□ -0.33
SED5YLR026C SSP1P38871 571 aa12.98□□□□□ -0.33
SED5YLR026C BDF1P35817 686 aa12.97□□□□□ -0.33
SED5YLR026C AI2P03876 854 aa12.95□□□□□ -0.34
SED5YLR026C BBC1P47068 1157 aa12.9□□□□□ -0.34
SED5YLR026C TIF4632P39936 914 aaKnown RBP12.86□□□□□ -0.35
SED5YLR026C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.83□□□□□ -0.36not detected
SED5YLR026C TGL3P40308 642 aa12.78□□□□□ -0.36
SED5YLR026C PSD2P53037 1138 aaKnown RBP12.73□□□□□ -0.37
SED5YLR026C CST9Q06032 482 aa12.6□□□□□ -0.39
SED5YLR026C MGA2P40578 1113 aa12.59□□□□□ -0.39
SED5YLR026C MRM1P25270 412 aa12.54□□□□□ -0.4
SED5YLR026C NSR1P27476 414 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
SED5YLR026C YAP5P40574 245 aa12.34□□□□□ -0.43
SED5YLR026C YOR238WQ08634 303 aa12.34□□□□□ -0.43
SED5YLR026C BUD31P25337 157 aaPredicted RBP12.33□□□□□ -0.44
SED5YLR026C MST1P07236 462 aa12.3□□□□□ -0.44
SED5YLR026C RTG3P38165 486 aa12.27□□□□□ -0.45
SED5YLR026C RCR1P38212 213 aa12.26□□□□□ -0.45
SED5YLR026C VPS29P38759 282 aa12.22□□□□□ -0.45
SED5YLR026C PIB1Q06651 286 aa12.22□□□□□ -0.45
SED5YLR026C UBP9P39967 754 aa12.21□□□□□ -0.45
SED5YLR026C YMR1P47147 688 aaKnown RBP RIP-Chip data12.14□□□□□ -0.47not detected
SED5YLR026C YFR006WP43590 535 aa12.12□□□□□ -0.47
SED5YLR026C DBP1P24784 617 aaKnown RBP12.11□□□□□ -0.47
SED5YLR026C STS1P38637 319 aa12.09□□□□□ -0.47
SED5YLR026C YBL029C-AQ3E756 94 aa12.09□□□□□ -0.47
SED5YLR026C GTT3P39996 337 aa12.06□□□□□ -0.48
SED5YLR026C WSC3Q12215 556 aa12.04□□□□□ -0.48
SED5YLR026C RAM2P29703 316 aa12.02□□□□□ -0.49
SED5YLR026C VNX1P42839 908 aa11.96□□□□□ -0.49
SED5YLR026C VMA1P17255 1071 aaKnown RBP11.91□□□□□ -0.5
SED5YLR026C MAK11P20484 414 aaKnown RBP11.86□□□□□ -0.51
SED5YLR026C SPP1Q03012 353 aa11.86□□□□□ -0.51
SED5YLR026C SIS1P25294 352 aaKnown RBP11.84□□□□□ -0.51
SED5YLR026C SET4P42948 560 aa11.8□□□□□ -0.52
SED5YLR026C YOL036WQ08206 761 aa11.8□□□□□ -0.52
SED5YLR026C MIF2P35201 549 aa11.79□□□□□ -0.52
SED5YLR026C TIF11P38912 153 aaKnown RBP11.79□□□□□ -0.52
SED5YLR026C SAM3Q08986 587 aa11.78□□□□□ -0.52
SED5YLR026C COQ8P27697 501 aa11.73□□□□□ -0.53
SED5YLR026C EDS1P38073 919 aa11.73□□□□□ -0.53
SED5YLR026C MSB4Q12317 492 aa11.73□□□□□ -0.53
SED5YLR026C ULI1P43604 169 aa11.72□□□□□ -0.53
SED5YLR026C GYP5Q12344 894 aa11.69□□□□□ -0.54
SED5YLR026C EAP1P36041 632 aaKnown RBP11.65□□□□□ -0.54
SED5YLR026C PTC3P34221 468 aaKnown RBP11.64□□□□□ -0.55
SED5YLR026C IOC2Q12072 812 aa11.64□□□□□ -0.55
SED5YLR026C TRP5P00931 707 aaKnown RBP11.63□□□□□ -0.55
SED5YLR026C DCW1P36091 449 aa11.61□□□□□ -0.55
SED5YLR026C GRE2Q12068 342 aaKnown RBP11.61□□□□□ -0.55
SED5YLR026C LDB19Q12502 818 aa11.61□□□□□ -0.55
SED5YLR026C SET1P38827 1080 aaKnown RBP11.57□□□□□ -0.56
SED5YLR026C DMA1P38823 416 aa11.56□□□□□ -0.56
SED5YLR026C ATH1P48016 1211 aa11.55□□□□□ -0.56
SED5YLR026C HTA1P04911 132 aaKnown RBP11.53□□□□□ -0.56
SED5YLR026C HTA2P04912 132 aa11.53□□□□□ -0.56
SED5YLR026C ABP1P15891 592 aaKnown RBP11.53□□□□□ -0.56
SED5YLR026C FKH1P40466 484 aa11.51□□□□□ -0.57
SED5YLR026C GUT1P32190 709 aa11.49□□□□□ -0.57
SED5YLR026C RTG1P32607 177 aa11.49□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms