RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W MTC1P47018 478 aaKnown RBP20.07■□□□□ 0.8
LSM12YHR121W DRS1P32892 752 aaKnown RBP19.34■□□□□ 0.69
LSM12YHR121W FAP1P53971 965 aa17.44■□□□□ 0.38
LSM12YHR121W DIP2Q12220 943 aaPredicted RBP16.73■□□□□ 0.27
LSM12YHR121W PRI1P10363 409 aa16.57■□□□□ 0.24
LSM12YHR121W ISW2Q08773 1120 aa16.57■□□□□ 0.24
LSM12YHR121W AAD16Q02895 342 aa16.43■□□□□ 0.22
LSM12YHR121W BFR2Q06631 534 aaKnown RBP16.37■□□□□ 0.21
LSM12YHR121W PRY3P47033 881 aa16.34■□□□□ 0.21
LSM12YHR121W RPG1P38249 964 aaKnown RBP16.3■□□□□ 0.2
LSM12YHR121W AVT3P36062 692 aa16.25■□□□□ 0.19
LSM12YHR121W RSE1Q04693 1361 aaKnown RBP16.05■□□□□ 0.16
LSM12YHR121W TSR3Q12094 313 aaKnown RBP15.69■□□□□ 0.1
LSM12YHR121W RPL17AP05740 184 aaKnown RBP15.47■□□□□ 0.07
LSM12YHR121W RPL17BP46990 184 aaKnown RBP15.47■□□□□ 0.07
LSM12YHR121W REB1P21538 810 aa15.4■□□□□ 0.06
LSM12YHR121W HAA1Q12753 694 aaKnown RBP15.4■□□□□ 0.06
LSM12YHR121W YCK3P39962 524 aa15.3■□□□□ 0.04
LSM12YHR121W MRPL32P25348 183 aa15.14■□□□□ 0.01
LSM12YHR121W SPT21P35209 758 aa14.81□□□□□ -0.04
LSM12YHR121W TFA1P36100 482 aa14.81□□□□□ -0.04
LSM12YHR121W YKR023WP36119 530 aaKnown RBP14.5□□□□□ -0.09
LSM12YHR121W RIM101P33400 625 aa14.43□□□□□ -0.1
LSM12YHR121W CDC27P38042 758 aa14.39□□□□□ -0.11
LSM12YHR121W YGL015CP33199 130 aa14.35□□□□□ -0.11
LSM12YHR121W TFC8Q12308 588 aa14.24□□□□□ -0.13
LSM12YHR121W HOP09932 586 aa14.22□□□□□ -0.13
LSM12YHR121W DCD1P06773 312 aa14.12□□□□□ -0.15
LSM12YHR121W UBP10P53874 792 aaPredicted RBP14□□□□□ -0.17
LSM12YHR121W OXP1P28273 1286 aa13.92□□□□□ -0.18
LSM12YHR121W MAP2P38174 421 aaKnown RBP13.91□□□□□ -0.18
LSM12YHR121W YIL055CP40523 627 aaKnown RBP13.84□□□□□ -0.19
LSM12YHR121W PTP3P40048 928 aa13.8□□□□□ -0.2
LSM12YHR121W BCH2P36122 765 aa13.78□□□□□ -0.2
LSM12YHR121W SCY1P53009 804 aa13.76□□□□□ -0.21
LSM12YHR121W YAH1Q12184 172 aaKnown RBP13.67□□□□□ -0.22
LSM12YHR121W RSM7P47150 247 aa13.59□□□□□ -0.23
LSM12YHR121W SLX5P32828 619 aaKnown RBP13.58□□□□□ -0.24
LSM12YHR121W EPS1P40557 701 aa13.5□□□□□ -0.25
LSM12YHR121W TIF4632P39936 914 aaKnown RBP13.47□□□□□ -0.25
LSM12YHR121W SSP1P38871 571 aa13.45□□□□□ -0.26
LSM12YHR121W BBC1P47068 1157 aa13.45□□□□□ -0.26
LSM12YHR121W YLR271WQ06152 274 aa13.43□□□□□ -0.26
LSM12YHR121W BDF1P35817 686 aa13.42□□□□□ -0.26
LSM12YHR121W AI2P03876 854 aa13.41□□□□□ -0.26
LSM12YHR121W ARP8Q12386 881 aaKnown RBP RIP-Chip data13.39□□□□□ -0.27not detected
LSM12YHR121W TGL3P40308 642 aa13.34□□□□□ -0.27
LSM12YHR121W PSD2P53037 1138 aaKnown RBP13.18□□□□□ -0.3
LSM12YHR121W MGA2P40578 1113 aa13.08□□□□□ -0.32
LSM12YHR121W CST9Q06032 482 aa12.98□□□□□ -0.33
LSM12YHR121W MRM1P25270 412 aa12.96□□□□□ -0.33
LSM12YHR121W NSR1P27476 414 aaKnown RBP RIP-Chip data12.95□□□□□ -0.34 RIP-Chip
LSM12YHR121W YAP5P40574 245 aa12.88□□□□□ -0.35
LSM12YHR121W YOR238WQ08634 303 aa12.87□□□□□ -0.35
LSM12YHR121W BUD31P25337 157 aaPredicted RBP12.86□□□□□ -0.35
LSM12YHR121W MST1P07236 462 aa12.81□□□□□ -0.36
LSM12YHR121W UBP9P39967 754 aa12.81□□□□□ -0.36
LSM12YHR121W RTG3P38165 486 aa12.75□□□□□ -0.37
LSM12YHR121W YMR1P47147 688 aaKnown RBP RIP-Chip data12.63□□□□□ -0.39not detected
LSM12YHR121W VPS29P38759 282 aa12.62□□□□□ -0.39
LSM12YHR121W RCR1P38212 213 aa12.6□□□□□ -0.39
LSM12YHR121W GTT3P39996 337 aa12.6□□□□□ -0.39
LSM12YHR121W PIB1Q06651 286 aa12.58□□□□□ -0.4
LSM12YHR121W DBP1P24784 617 aaKnown RBP12.54□□□□□ -0.4
LSM12YHR121W YBL029C-AQ3E756 94 aa12.52□□□□□ -0.41
LSM12YHR121W STS1P38637 319 aa12.48□□□□□ -0.41
LSM12YHR121W YFR006WP43590 535 aa12.48□□□□□ -0.41
LSM12YHR121W WSC3Q12215 556 aa12.46□□□□□ -0.41
LSM12YHR121W VNX1P42839 908 aa12.42□□□□□ -0.42
LSM12YHR121W RAM2P29703 316 aa12.39□□□□□ -0.43
LSM12YHR121W VMA1P17255 1071 aaKnown RBP12.36□□□□□ -0.43
LSM12YHR121W SPP1Q03012 353 aa12.36□□□□□ -0.43
LSM12YHR121W SIS1P25294 352 aaKnown RBP12.35□□□□□ -0.43
LSM12YHR121W MAK11P20484 414 aaKnown RBP12.34□□□□□ -0.43
LSM12YHR121W MSB4Q12317 492 aa12.31□□□□□ -0.44
LSM12YHR121W TIF11P38912 153 aaKnown RBP12.29□□□□□ -0.44
LSM12YHR121W YOL036WQ08206 761 aa12.26□□□□□ -0.45
LSM12YHR121W SAM3Q08986 587 aa12.26□□□□□ -0.45
LSM12YHR121W SET4P42948 560 aa12.24□□□□□ -0.45
LSM12YHR121W EAP1P36041 632 aaKnown RBP12.22□□□□□ -0.45
LSM12YHR121W MIF2P35201 549 aa12.21□□□□□ -0.45
LSM12YHR121W ULI1P43604 169 aa12.19□□□□□ -0.46
LSM12YHR121W ABP1P15891 592 aaKnown RBP12.15□□□□□ -0.46
LSM12YHR121W COQ8P27697 501 aa12.15□□□□□ -0.46
LSM12YHR121W GYP5Q12344 894 aa12.15□□□□□ -0.46
LSM12YHR121W EDS1P38073 919 aa12.09□□□□□ -0.47
LSM12YHR121W GRE2Q12068 342 aaKnown RBP12.09□□□□□ -0.47
LSM12YHR121W IOC2Q12072 812 aa12.08□□□□□ -0.48
LSM12YHR121W LDB19Q12502 818 aa12.08□□□□□ -0.48
LSM12YHR121W TRP5P00931 707 aaKnown RBP12.07□□□□□ -0.48
LSM12YHR121W PTC3P34221 468 aaKnown RBP12.06□□□□□ -0.48
LSM12YHR121W NOP53Q12080 455 aaKnown RBP12.04□□□□□ -0.48
LSM12YHR121W HTA1P04911 132 aaKnown RBP12.03□□□□□ -0.48
LSM12YHR121W HTA2P04912 132 aa12.03□□□□□ -0.48
LSM12YHR121W ATH1P48016 1211 aa12.03□□□□□ -0.48
LSM12YHR121W DCW1P36091 449 aa12.02□□□□□ -0.49
LSM12YHR121W FKH1P40466 484 aa12□□□□□ -0.49
LSM12YHR121W GUT1P32190 709 aa11.98□□□□□ -0.49
LSM12YHR121W SET1P38827 1080 aaKnown RBP11.98□□□□□ -0.49
LSM12YHR121W YNL035CP53962 389 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms