RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C MTC1P47018 478 aaKnown RBP18.05■□□□□ 0.48
PEX12YMR026C DRS1P32892 752 aaKnown RBP17.9■□□□□ 0.46
PEX12YMR026C BFR2Q06631 534 aaKnown RBP15.39■□□□□ 0.05
PEX12YMR026C DIP2Q12220 943 aaPredicted RBP15.32■□□□□ 0.04
PEX12YMR026C AVT3P36062 692 aa15.07■□□□□ 0
PEX12YMR026C FAP1P53971 965 aa15.06■□□□□ 0
PEX12YMR026C ISW2Q08773 1120 aa14.73□□□□□ -0.05
PEX12YMR026C PRI1P10363 409 aa14.63□□□□□ -0.07
PEX12YMR026C RPG1P38249 964 aaKnown RBP14.55□□□□□ -0.08
PEX12YMR026C RSE1Q04693 1361 aaKnown RBP14.52□□□□□ -0.08
PEX12YMR026C AAD16Q02895 342 aa14.41□□□□□ -0.1
PEX12YMR026C TFA1P36100 482 aa14.33□□□□□ -0.12
PEX12YMR026C PRY3P47033 881 aa14.09□□□□□ -0.15
PEX12YMR026C RPL17AP05740 184 aaKnown RBP14□□□□□ -0.17
PEX12YMR026C RPL17BP46990 184 aaKnown RBP14□□□□□ -0.17
PEX12YMR026C TSR3Q12094 313 aaKnown RBP13.89□□□□□ -0.19
PEX12YMR026C REB1P21538 810 aa13.84□□□□□ -0.19
PEX12YMR026C SPT21P35209 758 aa13.46□□□□□ -0.25
PEX12YMR026C MRPL32P25348 183 aa13.35□□□□□ -0.27
PEX12YMR026C YCK3P39962 524 aa13.35□□□□□ -0.27
PEX12YMR026C HAA1Q12753 694 aaKnown RBP13.3□□□□□ -0.28
PEX12YMR026C RIM101P33400 625 aa13.25□□□□□ -0.29
PEX12YMR026C YKR023WP36119 530 aaKnown RBP13.08□□□□□ -0.32
PEX12YMR026C CDC27P38042 758 aa12.86□□□□□ -0.35
PEX12YMR026C OXP1P28273 1286 aa12.82□□□□□ -0.36
PEX12YMR026C TFC8Q12308 588 aa12.82□□□□□ -0.36
PEX12YMR026C HOP09932 586 aa12.81□□□□□ -0.36
PEX12YMR026C DCD1P06773 312 aa12.71□□□□□ -0.37
PEX12YMR026C YIL055CP40523 627 aaKnown RBP12.65□□□□□ -0.38
PEX12YMR026C PTP3P40048 928 aa12.63□□□□□ -0.39
PEX12YMR026C YAH1Q12184 172 aaKnown RBP12.59□□□□□ -0.39
PEX12YMR026C SSP1P38871 571 aa12.55□□□□□ -0.4
PEX12YMR026C YGL015CP33199 130 aa12.51□□□□□ -0.41
PEX12YMR026C RSM7P47150 247 aa12.46□□□□□ -0.41
PEX12YMR026C BCH2P36122 765 aa12.44□□□□□ -0.42
PEX12YMR026C YLR271WQ06152 274 aa12.44□□□□□ -0.42
PEX12YMR026C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.37□□□□□ -0.43 RIP-Chip
PEX12YMR026C UBP10P53874 792 aaPredicted RBP12.35□□□□□ -0.43
PEX12YMR026C MAP2P38174 421 aaKnown RBP12.33□□□□□ -0.44
PEX12YMR026C SCY1P53009 804 aa12.28□□□□□ -0.44
PEX12YMR026C AI2P03876 854 aa12.25□□□□□ -0.45
PEX12YMR026C EPS1P40557 701 aa12.21□□□□□ -0.45
PEX12YMR026C BBC1P47068 1157 aa12.18□□□□□ -0.46
PEX12YMR026C BDF1P35817 686 aa12.13□□□□□ -0.47
PEX12YMR026C MGA2P40578 1113 aa12.13□□□□□ -0.47
PEX12YMR026C PSD2P53037 1138 aaKnown RBP12.12□□□□□ -0.47
PEX12YMR026C SLX5P32828 619 aaKnown RBP12.06□□□□□ -0.48
PEX12YMR026C CST9Q06032 482 aa12.04□□□□□ -0.48
PEX12YMR026C RQC2Q12532 1038 aaKnown RBP11.89□□□□□ -0.51
PEX12YMR026C MRM1P25270 412 aa11.86□□□□□ -0.51
PEX12YMR026C TIF4632P39936 914 aaKnown RBP11.85□□□□□ -0.51
PEX12YMR026C TGL3P40308 642 aa11.79□□□□□ -0.52
PEX12YMR026C DMA1P38823 416 aa11.72□□□□□ -0.53
PEX12YMR026C RTG3P38165 486 aa11.69□□□□□ -0.54
PEX12YMR026C RCR1P38212 213 aa11.64□□□□□ -0.55
PEX12YMR026C VPS29P38759 282 aa11.59□□□□□ -0.55
PEX12YMR026C RAM2P29703 316 aa11.58□□□□□ -0.56
PEX12YMR026C NSR1P27476 414 aaKnown RBP RIP-Chip data11.57□□□□□ -0.56 RIP-Chip
PEX12YMR026C YAP5P40574 245 aa11.51□□□□□ -0.57
PEX12YMR026C YMR1P47147 688 aaKnown RBP RIP-Chip data11.5□□□□□ -0.57not detected
PEX12YMR026C YOR238WQ08634 303 aa11.47□□□□□ -0.57
PEX12YMR026C DBP1P24784 617 aaKnown RBP11.43□□□□□ -0.58
PEX12YMR026C MAK11P20484 414 aaKnown RBP11.42□□□□□ -0.58
PEX12YMR026C STS1P38637 319 aa11.42□□□□□ -0.58
PEX12YMR026C MST1P07236 462 aa11.41□□□□□ -0.58
PEX12YMR026C YFR006WP43590 535 aa11.4□□□□□ -0.58
PEX12YMR026C PIB1Q06651 286 aa11.36□□□□□ -0.59
PEX12YMR026C SET1P38827 1080 aaKnown RBP11.28□□□□□ -0.6
PEX12YMR026C COQ8P27697 501 aa11.26□□□□□ -0.61
PEX12YMR026C MIF2P35201 549 aa11.24□□□□□ -0.61
PEX12YMR026C VMA1P17255 1071 aaKnown RBP11.22□□□□□ -0.61
PEX12YMR026C GTT3P39996 337 aa11.21□□□□□ -0.61
PEX12YMR026C EDS1P38073 919 aa11.2□□□□□ -0.62
PEX12YMR026C SAS10Q12136 610 aaPredicted RBP11.18□□□□□ -0.62
PEX12YMR026C NOP53Q12080 455 aaKnown RBP11.17□□□□□ -0.62
PEX12YMR026C PTC3P34221 468 aaKnown RBP11.12□□□□□ -0.63
PEX12YMR026C SAM3Q08986 587 aa11.12□□□□□ -0.63
PEX12YMR026C IFH1P39520 1085 aa11.1□□□□□ -0.63
PEX12YMR026C UBP9P39967 754 aa11.1□□□□□ -0.63
PEX12YMR026C YPR148CQ06523 435 aa11.08□□□□□ -0.64
PEX12YMR026C WSC3Q12215 556 aa11.06□□□□□ -0.64
PEX12YMR026C YBL029C-AQ3E756 94 aa11.04□□□□□ -0.64
PEX12YMR026C BUD31P25337 157 aaPredicted RBP11.03□□□□□ -0.64
PEX12YMR026C YOL036WQ08206 761 aa11.03□□□□□ -0.64
PEX12YMR026C GRE2Q12068 342 aaKnown RBP11.02□□□□□ -0.65
PEX12YMR026C GYP5Q12344 894 aa11.02□□□□□ -0.65
PEX12YMR026C VPS70P47161 811 aa11.01□□□□□ -0.65
PEX12YMR026C VNX1P42839 908 aa11□□□□□ -0.65
PEX12YMR026C SET4P42948 560 aa11□□□□□ -0.65
PEX12YMR026C ATH1P48016 1211 aa10.99□□□□□ -0.65
PEX12YMR026C MSB4Q12317 492 aa10.99□□□□□ -0.65
PEX12YMR026C GUT1P32190 709 aa10.96□□□□□ -0.65
PEX12YMR026C ABP1P15891 592 aaKnown RBP10.93□□□□□ -0.66
PEX12YMR026C CKB1P43639 278 aa10.93□□□□□ -0.66
PEX12YMR026C DCW1P36091 449 aa10.92□□□□□ -0.66
PEX12YMR026C SPP1Q03012 353 aa10.9□□□□□ -0.66
PEX12YMR026C EAP1P36041 632 aaKnown RBP10.89□□□□□ -0.67
PEX12YMR026C TIF11P38912 153 aaKnown RBP10.89□□□□□ -0.67
PEX12YMR026C HTA1P04911 132 aaKnown RBP10.87□□□□□ -0.67
PEX12YMR026C HTA2P04912 132 aa10.87□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms