RNA–Protein interactions for RNA: YMR146C

TIF34, Transcript of eIF3i subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene TIF34, Length 1,044 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIF34YMR146C MTC1P47018 478 aaKnown RBP18.63■□□□□ 0.57
TIF34YMR146C DRS1P32892 752 aaKnown RBP18.16■□□□□ 0.5
TIF34YMR146C FAP1P53971 965 aa15.91■□□□□ 0.14
TIF34YMR146C DIP2Q12220 943 aaPredicted RBP15.65■□□□□ 0.1
TIF34YMR146C BFR2Q06631 534 aaKnown RBP15.46■□□□□ 0.07
TIF34YMR146C AVT3P36062 692 aa15.29■□□□□ 0.04
TIF34YMR146C PRI1P10363 409 aa15.28■□□□□ 0.04
TIF34YMR146C ISW2Q08773 1120 aa15.27■□□□□ 0.04
TIF34YMR146C RPG1P38249 964 aaKnown RBP15.1■□□□□ 0.01
TIF34YMR146C AAD16Q02895 342 aa15.09■□□□□ 0.01
TIF34YMR146C PRY3P47033 881 aa14.92□□□□□ -0.02
TIF34YMR146C RSE1Q04693 1361 aaKnown RBP14.91□□□□□ -0.02
TIF34YMR146C TSR3Q12094 313 aaKnown RBP14.49□□□□□ -0.09
TIF34YMR146C RPL17AP05740 184 aaKnown RBP14.4□□□□□ -0.1
TIF34YMR146C RPL17BP46990 184 aaKnown RBP14.4□□□□□ -0.1
TIF34YMR146C REB1P21538 810 aa14.26□□□□□ -0.13
TIF34YMR146C TFA1P36100 482 aa14.17□□□□□ -0.14
TIF34YMR146C YCK3P39962 524 aa14.11□□□□□ -0.15
TIF34YMR146C HAA1Q12753 694 aaKnown RBP14.04□□□□□ -0.16
TIF34YMR146C MRPL32P25348 183 aa13.91□□□□□ -0.18
TIF34YMR146C SPT21P35209 758 aa13.83□□□□□ -0.2
TIF34YMR146C RIM101P33400 625 aa13.52□□□□□ -0.25
TIF34YMR146C YKR023WP36119 530 aaKnown RBP13.51□□□□□ -0.25
TIF34YMR146C CDC27P38042 758 aa13.36□□□□□ -0.27
TIF34YMR146C HOP09932 586 aa13.24□□□□□ -0.29
TIF34YMR146C TFC8Q12308 588 aa13.23□□□□□ -0.29
TIF34YMR146C DCD1P06773 312 aa13.15□□□□□ -0.3
TIF34YMR146C YGL015CP33199 130 aa13.12□□□□□ -0.31
TIF34YMR146C OXP1P28273 1286 aa13.09□□□□□ -0.31
TIF34YMR146C YIL055CP40523 627 aaKnown RBP12.9□□□□□ -0.34
TIF34YMR146C UBP10P53874 792 aaPredicted RBP12.87□□□□□ -0.35
TIF34YMR146C PTP3P40048 928 aa12.86□□□□□ -0.35
TIF34YMR146C MAP2P38174 421 aaKnown RBP12.85□□□□□ -0.35
TIF34YMR146C BCH2P36122 765 aa12.83□□□□□ -0.36
TIF34YMR146C YAH1Q12184 172 aaKnown RBP12.82□□□□□ -0.36
TIF34YMR146C SCY1P53009 804 aa12.73□□□□□ -0.37
TIF34YMR146C RSM7P47150 247 aa12.7□□□□□ -0.38
TIF34YMR146C SSP1P38871 571 aa12.67□□□□□ -0.38
TIF34YMR146C YLR271WQ06152 274 aa12.64□□□□□ -0.39
TIF34YMR146C EPS1P40557 701 aa12.57□□□□□ -0.4
TIF34YMR146C SLX5P32828 619 aaKnown RBP12.53□□□□□ -0.4
TIF34YMR146C AI2P03876 854 aa12.52□□□□□ -0.41
TIF34YMR146C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.52□□□□□ -0.41not detected
TIF34YMR146C BDF1P35817 686 aa12.49□□□□□ -0.41
TIF34YMR146C BBC1P47068 1157 aa12.48□□□□□ -0.41
TIF34YMR146C PSD2P53037 1138 aaKnown RBP12.36□□□□□ -0.43
TIF34YMR146C TIF4632P39936 914 aaKnown RBP12.34□□□□□ -0.43
TIF34YMR146C MGA2P40578 1113 aa12.28□□□□□ -0.44
TIF34YMR146C TGL3P40308 642 aa12.27□□□□□ -0.45
TIF34YMR146C CST9Q06032 482 aa12.22□□□□□ -0.45
TIF34YMR146C MRM1P25270 412 aa12.12□□□□□ -0.47
TIF34YMR146C NSR1P27476 414 aaKnown RBP RIP-Chip data11.95□□□□□ -0.5not detected
TIF34YMR146C RTG3P38165 486 aa11.91□□□□□ -0.5
TIF34YMR146C YAP5P40574 245 aa11.89□□□□□ -0.51
TIF34YMR146C YOR238WQ08634 303 aa11.87□□□□□ -0.51
TIF34YMR146C RCR1P38212 213 aa11.86□□□□□ -0.51
TIF34YMR146C MST1P07236 462 aa11.85□□□□□ -0.51
TIF34YMR146C VPS29P38759 282 aa11.84□□□□□ -0.51
TIF34YMR146C YMR1P47147 688 aaKnown RBP RIP-Chip data11.77□□□□□ -0.53not detected
TIF34YMR146C PIB1Q06651 286 aa11.72□□□□□ -0.53
TIF34YMR146C DBP1P24784 617 aaKnown RBP11.7□□□□□ -0.54
TIF34YMR146C RAM2P29703 316 aa11.7□□□□□ -0.54
TIF34YMR146C BUD31P25337 157 aaPredicted RBP11.68□□□□□ -0.54
TIF34YMR146C STS1P38637 319 aa11.68□□□□□ -0.54
TIF34YMR146C YFR006WP43590 535 aa11.68□□□□□ -0.54
TIF34YMR146C UBP9P39967 754 aa11.66□□□□□ -0.54
TIF34YMR146C GTT3P39996 337 aa11.6□□□□□ -0.55
TIF34YMR146C MAK11P20484 414 aaKnown RBP11.57□□□□□ -0.56
TIF34YMR146C YBL029C-AQ3E756 94 aa11.54□□□□□ -0.56
TIF34YMR146C VMA1P17255 1071 aaKnown RBP11.51□□□□□ -0.57
TIF34YMR146C WSC3Q12215 556 aa11.5□□□□□ -0.57
TIF34YMR146C DMA1P38823 416 aa11.46□□□□□ -0.57
TIF34YMR146C VNX1P42839 908 aa11.46□□□□□ -0.57
TIF34YMR146C MIF2P35201 549 aa11.43□□□□□ -0.58
TIF34YMR146C COQ8P27697 501 aa11.42□□□□□ -0.58
TIF34YMR146C SAM3Q08986 587 aa11.42□□□□□ -0.58
TIF34YMR146C EDS1P38073 919 aa11.38□□□□□ -0.59
TIF34YMR146C YOL036WQ08206 761 aa11.38□□□□□ -0.59
TIF34YMR146C RQC2Q12532 1038 aaKnown RBP11.38□□□□□ -0.59
TIF34YMR146C SET4P42948 560 aa11.35□□□□□ -0.59
TIF34YMR146C SPP1Q03012 353 aa11.35□□□□□ -0.59
TIF34YMR146C MSB4Q12317 492 aa11.35□□□□□ -0.59
TIF34YMR146C SET1P38827 1080 aaKnown RBP11.32□□□□□ -0.6
TIF34YMR146C TIF11P38912 153 aaKnown RBP11.32□□□□□ -0.6
TIF34YMR146C PTC3P34221 468 aaKnown RBP11.31□□□□□ -0.6
TIF34YMR146C GYP5Q12344 894 aa11.3□□□□□ -0.6
TIF34YMR146C NOP53Q12080 455 aaKnown RBP11.27□□□□□ -0.61
TIF34YMR146C EAP1P36041 632 aaKnown RBP11.25□□□□□ -0.61
TIF34YMR146C ULI1P43604 169 aa11.25□□□□□ -0.61
TIF34YMR146C GRE2Q12068 342 aaKnown RBP11.25□□□□□ -0.61
TIF34YMR146C ABP1P15891 592 aaKnown RBP11.22□□□□□ -0.61
TIF34YMR146C SIS1P25294 352 aaKnown RBP11.21□□□□□ -0.61
TIF34YMR146C ATH1P48016 1211 aa11.21□□□□□ -0.61
TIF34YMR146C DCW1P36091 449 aa11.2□□□□□ -0.62
TIF34YMR146C IOC2Q12072 812 aa11.19□□□□□ -0.62
TIF34YMR146C TRP5P00931 707 aaKnown RBP11.18□□□□□ -0.62
TIF34YMR146C GUT1P32190 709 aa11.18□□□□□ -0.62
TIF34YMR146C HTA1P04911 132 aaKnown RBP11.16□□□□□ -0.62
TIF34YMR146C HTA2P04912 132 aa11.16□□□□□ -0.62
TIF34YMR146C LDB19Q12502 818 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms