RNA–Protein interactions for RNA: YFL021W

GAT1, Transcript of Transcriptional activator of nitrogen catabolite repression genes, yeastyeast

Gene GAT1, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAT1YFL021W MTC1P47018 478 aaKnown RBP18.25■□□□□ 0.51
GAT1YFL021W DRS1P32892 752 aaKnown RBP18.21■□□□□ 0.51
GAT1YFL021W BFR2Q06631 534 aaKnown RBP15.71■□□□□ 0.11
GAT1YFL021W DIP2Q12220 943 aaPredicted RBP15.53■□□□□ 0.08
GAT1YFL021W AVT3P36062 692 aa15.36■□□□□ 0.05
GAT1YFL021W FAP1P53971 965 aa14.97□□□□□ -0.01
GAT1YFL021W ISW2Q08773 1120 aa14.8□□□□□ -0.04
GAT1YFL021W TFA1P36100 482 aa14.76□□□□□ -0.05
GAT1YFL021W PRI1P10363 409 aa14.7□□□□□ -0.06
GAT1YFL021W RSE1Q04693 1361 aaKnown RBP14.67□□□□□ -0.06
GAT1YFL021W RPG1P38249 964 aaKnown RBP14.62□□□□□ -0.07
GAT1YFL021W AAD16Q02895 342 aa14.42□□□□□ -0.1
GAT1YFL021W RPL17AP05740 184 aaKnown RBP14.14□□□□□ -0.15
GAT1YFL021W RPL17BP46990 184 aaKnown RBP14.14□□□□□ -0.15
GAT1YFL021W PRY3P47033 881 aa14.05□□□□□ -0.16
GAT1YFL021W TSR3Q12094 313 aaKnown RBP13.95□□□□□ -0.18
GAT1YFL021W REB1P21538 810 aa13.93□□□□□ -0.18
GAT1YFL021W SPT21P35209 758 aa13.7□□□□□ -0.22
GAT1YFL021W RIM101P33400 625 aa13.44□□□□□ -0.26
GAT1YFL021W YCK3P39962 524 aa13.44□□□□□ -0.26
GAT1YFL021W MRPL32P25348 183 aa13.34□□□□□ -0.27
GAT1YFL021W YKR023WP36119 530 aaKnown RBP13.24□□□□□ -0.29
GAT1YFL021W HAA1Q12753 694 aaKnown RBP13.24□□□□□ -0.29
GAT1YFL021W OXP1P28273 1286 aa13.04□□□□□ -0.32
GAT1YFL021W CDC27P38042 758 aa12.99□□□□□ -0.33
GAT1YFL021W TFC8Q12308 588 aa12.96□□□□□ -0.33
GAT1YFL021W HOP09932 586 aa12.93□□□□□ -0.34
GAT1YFL021W PTP3P40048 928 aa12.88□□□□□ -0.35
GAT1YFL021W DCD1P06773 312 aa12.86□□□□□ -0.35
GAT1YFL021W YAH1Q12184 172 aaKnown RBP12.78□□□□□ -0.36
GAT1YFL021W SSP1P38871 571 aa12.77□□□□□ -0.37
GAT1YFL021W YIL055CP40523 627 aaKnown RBP12.74□□□□□ -0.37
GAT1YFL021W YLR271WQ06152 274 aa12.66□□□□□ -0.38
GAT1YFL021W RSM7P47150 247 aa12.61□□□□□ -0.39
GAT1YFL021W BCH2P36122 765 aa12.57□□□□□ -0.4
GAT1YFL021W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
GAT1YFL021W YGL015CP33199 130 aa12.45□□□□□ -0.42
GAT1YFL021W UBP10P53874 792 aaPredicted RBP12.43□□□□□ -0.42
GAT1YFL021W MAP2P38174 421 aaKnown RBP12.42□□□□□ -0.42
GAT1YFL021W AI2P03876 854 aa12.41□□□□□ -0.42
GAT1YFL021W SCY1P53009 804 aa12.37□□□□□ -0.43
GAT1YFL021W PSD2P53037 1138 aaKnown RBP12.36□□□□□ -0.43
GAT1YFL021W EPS1P40557 701 aa12.35□□□□□ -0.43
GAT1YFL021W MGA2P40578 1113 aa12.33□□□□□ -0.44
GAT1YFL021W BBC1P47068 1157 aa12.29□□□□□ -0.44
GAT1YFL021W CST9Q06032 482 aa12.28□□□□□ -0.44
GAT1YFL021W BDF1P35817 686 aa12.27□□□□□ -0.45
GAT1YFL021W RQC2Q12532 1038 aaKnown RBP12.26□□□□□ -0.45
GAT1YFL021W SLX5P32828 619 aaKnown RBP12.12□□□□□ -0.47
GAT1YFL021W DMA1P38823 416 aa12.09□□□□□ -0.47
GAT1YFL021W MRM1P25270 412 aa12.02□□□□□ -0.48
GAT1YFL021W RCR1P38212 213 aa11.9□□□□□ -0.5
GAT1YFL021W TIF4632P39936 914 aaKnown RBP11.86□□□□□ -0.51
GAT1YFL021W RAM2P29703 316 aa11.82□□□□□ -0.52
GAT1YFL021W RTG3P38165 486 aa11.82□□□□□ -0.52
GAT1YFL021W TGL3P40308 642 aa11.8□□□□□ -0.52
GAT1YFL021W VPS29P38759 282 aa11.76□□□□□ -0.53
GAT1YFL021W NSR1P27476 414 aaKnown RBP RIP-Chip data11.71□□□□□ -0.53not detected
GAT1YFL021W YMR1P47147 688 aaKnown RBP RIP-Chip data11.63□□□□□ -0.55not detected
GAT1YFL021W MAK11P20484 414 aaKnown RBP11.62□□□□□ -0.55
GAT1YFL021W STS1P38637 319 aa11.62□□□□□ -0.55
GAT1YFL021W YAP5P40574 245 aa11.59□□□□□ -0.55
GAT1YFL021W YOR238WQ08634 303 aa11.59□□□□□ -0.55
GAT1YFL021W DBP1P24784 617 aaKnown RBP11.55□□□□□ -0.56
GAT1YFL021W YFR006WP43590 535 aa11.55□□□□□ -0.56
GAT1YFL021W SAS10Q12136 610 aaPredicted RBP11.52□□□□□ -0.57
GAT1YFL021W SET1P38827 1080 aaKnown RBP11.5□□□□□ -0.57
GAT1YFL021W PIB1Q06651 286 aa11.5□□□□□ -0.57
GAT1YFL021W MST1P07236 462 aa11.49□□□□□ -0.57
GAT1YFL021W COQ8P27697 501 aa11.46□□□□□ -0.57
GAT1YFL021W EDS1P38073 919 aa11.42□□□□□ -0.58
GAT1YFL021W MIF2P35201 549 aa11.38□□□□□ -0.59
GAT1YFL021W VMA1P17255 1071 aaKnown RBP11.37□□□□□ -0.59
GAT1YFL021W YPR148CQ06523 435 aa11.37□□□□□ -0.59
GAT1YFL021W NOP53Q12080 455 aaKnown RBP11.31□□□□□ -0.6
GAT1YFL021W PTC3P34221 468 aaKnown RBP11.29□□□□□ -0.6
GAT1YFL021W IFH1P39520 1085 aa11.29□□□□□ -0.6
GAT1YFL021W GTT3P39996 337 aa11.26□□□□□ -0.61
GAT1YFL021W SAM3Q08986 587 aa11.26□□□□□ -0.61
GAT1YFL021W VPS70P47161 811 aa11.25□□□□□ -0.61
GAT1YFL021W YOL036WQ08206 761 aa11.16□□□□□ -0.62
GAT1YFL021W GRE2Q12068 342 aaKnown RBP11.15□□□□□ -0.62
GAT1YFL021W CKB1P43639 278 aa11.14□□□□□ -0.63
GAT1YFL021W GYP5Q12344 894 aa11.12□□□□□ -0.63
GAT1YFL021W WSC3Q12215 556 aa11.11□□□□□ -0.63
GAT1YFL021W ATH1P48016 1211 aa11.1□□□□□ -0.63
GAT1YFL021W YBL029C-AQ3E756 94 aa11.1□□□□□ -0.63
GAT1YFL021W GUT1P32190 709 aa11.09□□□□□ -0.63
GAT1YFL021W SET4P42948 560 aa11.09□□□□□ -0.63
GAT1YFL021W LEU3P08638 886 aa11.07□□□□□ -0.64
GAT1YFL021W MSB4Q12317 492 aa11.07□□□□□ -0.64
GAT1YFL021W VNX1P42839 908 aa11.04□□□□□ -0.64
GAT1YFL021W ABP1P15891 592 aaKnown RBP11.03□□□□□ -0.64
GAT1YFL021W UBP9P39967 754 aa11.02□□□□□ -0.65
GAT1YFL021W DCW1P36091 449 aa11.01□□□□□ -0.65
GAT1YFL021W SOL3P38858 249 aa11.01□□□□□ -0.65
GAT1YFL021W REF2P42073 533 aaPredicted RBP11.01□□□□□ -0.65
GAT1YFL021W NST1P53935 1240 aa10.99□□□□□ -0.65
GAT1YFL021W PBS2P08018 668 aa10.98□□□□□ -0.65
GAT1YFL021W YGR273CP53329 174 aa10.98□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms