RNA–Protein interactions for RNA: YMR091C

NPL6, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene NPL6, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL6YMR091C DRS1P32892 752 aaKnown RBP17.22■□□□□ 0.35
NPL6YMR091C MTC1P47018 478 aaKnown RBP16.38■□□□□ 0.21
NPL6YMR091C BFR2Q06631 534 aaKnown RBP15.24■□□□□ 0.03
NPL6YMR091C TFA1P36100 482 aa14.83□□□□□ -0.04
NPL6YMR091C DIP2Q12220 943 aaPredicted RBP14.41□□□□□ -0.1
NPL6YMR091C AVT3P36062 692 aa14.39□□□□□ -0.11
NPL6YMR091C RQC2Q12532 1038 aaKnown RBP13.47□□□□□ -0.25
NPL6YMR091C RSE1Q04693 1361 aaKnown RBP13.41□□□□□ -0.26
NPL6YMR091C ISW2Q08773 1120 aa13.2□□□□□ -0.3
NPL6YMR091C RPG1P38249 964 aaKnown RBP12.97□□□□□ -0.33
NPL6YMR091C RPL17AP05740 184 aaKnown RBP12.86□□□□□ -0.35
NPL6YMR091C RPL17BP46990 184 aaKnown RBP12.86□□□□□ -0.35
NPL6YMR091C PRI1P10363 409 aa12.73□□□□□ -0.37
NPL6YMR091C REB1P21538 810 aa12.65□□□□□ -0.38
NPL6YMR091C FAP1P53971 965 aa12.63□□□□□ -0.39
NPL6YMR091C DMA1P38823 416 aa12.5□□□□□ -0.41
NPL6YMR091C PTP3P40048 928 aa12.46□□□□□ -0.41
NPL6YMR091C AAD16Q02895 342 aa12.43□□□□□ -0.42
NPL6YMR091C RIM101P33400 625 aa12.39□□□□□ -0.43
NPL6YMR091C SPT21P35209 758 aa12.38□□□□□ -0.43
NPL6YMR091C SSP1P38871 571 aa12.2□□□□□ -0.46
NPL6YMR091C TSR3Q12094 313 aaKnown RBP12.13□□□□□ -0.47
NPL6YMR091C OXP1P28273 1286 aa12.02□□□□□ -0.49
NPL6YMR091C ARP8Q12386 881 aaKnown RBP RIP-Chip data12□□□□□ -0.49not detected
NPL6YMR091C YAH1Q12184 172 aaKnown RBP11.99□□□□□ -0.49
NPL6YMR091C TAF7Q05021 590 aa11.94□□□□□ -0.5
NPL6YMR091C YIL055CP40523 627 aaKnown RBP11.93□□□□□ -0.5
NPL6YMR091C YLR271WQ06152 274 aa11.83□□□□□ -0.52
NPL6YMR091C YKR023WP36119 530 aaKnown RBP11.82□□□□□ -0.52
NPL6YMR091C LEO1P38439 464 aa11.78□□□□□ -0.52
NPL6YMR091C PRY3P47033 881 aa11.77□□□□□ -0.53
NPL6YMR091C MRPL32P25348 183 aa11.71□□□□□ -0.53
NPL6YMR091C MGA2P40578 1113 aa11.71□□□□□ -0.53
NPL6YMR091C RSM7P47150 247 aa11.7□□□□□ -0.54
NPL6YMR091C HOP09932 586 aa11.6□□□□□ -0.55
NPL6YMR091C TFC8Q12308 588 aa11.6□□□□□ -0.55
NPL6YMR091C SAS10Q12136 610 aaPredicted RBP11.58□□□□□ -0.56
NPL6YMR091C LEU3P08638 886 aa11.5□□□□□ -0.57
NPL6YMR091C CST9Q06032 482 aa11.5□□□□□ -0.57
NPL6YMR091C DCD1P06773 312 aa11.47□□□□□ -0.57
NPL6YMR091C AI2P03876 854 aa11.44□□□□□ -0.58
NPL6YMR091C PSD2P53037 1138 aaKnown RBP11.43□□□□□ -0.58
NPL6YMR091C CDC27P38042 758 aa11.38□□□□□ -0.59
NPL6YMR091C BBC1P47068 1157 aa11.36□□□□□ -0.59
NPL6YMR091C BCH2P36122 765 aa11.29□□□□□ -0.6
NPL6YMR091C RAM2P29703 316 aa11.18□□□□□ -0.62
NPL6YMR091C HAA1Q12753 694 aaKnown RBP11.17□□□□□ -0.62
NPL6YMR091C EPS1P40557 701 aa11.16□□□□□ -0.62
NPL6YMR091C RPN1P38764 993 aaKnown RBP11.15□□□□□ -0.62
NPL6YMR091C SET1P38827 1080 aaKnown RBP11.15□□□□□ -0.62
NPL6YMR091C MRM1P25270 412 aa11.13□□□□□ -0.63
NPL6YMR091C CKB1P43639 278 aa11.1□□□□□ -0.63
NPL6YMR091C SPB4P25808 606 aaPredicted RBP11.09□□□□□ -0.63
NPL6YMR091C IFH1P39520 1085 aa11.08□□□□□ -0.64
NPL6YMR091C VPS70P47161 811 aa11.07□□□□□ -0.64
NPL6YMR091C YCK3P39962 524 aa11.06□□□□□ -0.64
NPL6YMR091C YPR148CQ06523 435 aa11.06□□□□□ -0.64
NPL6YMR091C BDF1P35817 686 aa11.05□□□□□ -0.64
NPL6YMR091C RTG3P38165 486 aa11.04□□□□□ -0.64
NPL6YMR091C RCR1P38212 213 aa11.03□□□□□ -0.64
NPL6YMR091C MAK11P20484 414 aaKnown RBP10.98□□□□□ -0.65
NPL6YMR091C SCY1P53009 804 aa10.98□□□□□ -0.65
NPL6YMR091C DMA2P53924 522 aa10.94□□□□□ -0.66
NPL6YMR091C UBP10P53874 792 aaPredicted RBP10.86□□□□□ -0.67
NPL6YMR091C DSF2P38213 736 aa10.84□□□□□ -0.67
NPL6YMR091C PBS2P08018 668 aa10.83□□□□□ -0.68
NPL6YMR091C MAP2P38174 421 aaKnown RBP10.83□□□□□ -0.68
NPL6YMR091C COQ8P27697 501 aa10.82□□□□□ -0.68
NPL6YMR091C VPS29P38759 282 aa10.82□□□□□ -0.68
NPL6YMR091C NOP53Q12080 455 aaKnown RBP10.78□□□□□ -0.68
NPL6YMR091C SLX5P32828 619 aaKnown RBP10.74□□□□□ -0.69
NPL6YMR091C YMR1P47147 688 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
NPL6YMR091C YNR021WP53723 404 aaKnown RBP10.74□□□□□ -0.69
NPL6YMR091C MIF2P35201 549 aa10.71□□□□□ -0.69
NPL6YMR091C MAM3Q12296 706 aa10.69□□□□□ -0.7
NPL6YMR091C YGL015CP33199 130 aa10.68□□□□□ -0.7
NPL6YMR091C REF2P42073 533 aaPredicted RBP10.68□□□□□ -0.7
NPL6YMR091C KIN1P13185 1064 aa10.67□□□□□ -0.7
NPL6YMR091C RLF2Q12495 606 aa10.67□□□□□ -0.7
NPL6YMR091C STS1P38637 319 aa10.64□□□□□ -0.71
NPL6YMR091C DBP1P24784 617 aaKnown RBP10.62□□□□□ -0.71
NPL6YMR091C EDS1P38073 919 aa10.62□□□□□ -0.71
NPL6YMR091C IES2P40154 320 aa10.61□□□□□ -0.71
NPL6YMR091C GLC3P32775 704 aa10.6□□□□□ -0.71
NPL6YMR091C YFR006WP43590 535 aa10.6□□□□□ -0.71
NPL6YMR091C HGH1P48362 394 aaKnown RBP10.6□□□□□ -0.71
NPL6YMR091C AIM7Q12156 149 aa10.6□□□□□ -0.71
NPL6YMR091C MAK21Q12176 1025 aaKnown RBP10.58□□□□□ -0.71
NPL6YMR091C YOR238WQ08634 303 aa10.57□□□□□ -0.72
NPL6YMR091C DIT2P21595 489 aa10.54□□□□□ -0.72
NPL6YMR091C PTC3P34221 468 aaKnown RBP10.54□□□□□ -0.72
NPL6YMR091C NUP42P49686 430 aaKnown RBP10.54□□□□□ -0.72
NPL6YMR091C COX6P00427 148 aa10.52□□□□□ -0.73
NPL6YMR091C ABP1P15891 592 aaKnown RBP10.52□□□□□ -0.73
NPL6YMR091C ATF2P53296 535 aa10.49□□□□□ -0.73
NPL6YMR091C TIF4632P39936 914 aaKnown RBP10.45□□□□□ -0.74
NPL6YMR091C NSR1P27476 414 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
NPL6YMR091C YAP5P40574 245 aa10.42□□□□□ -0.74
NPL6YMR091C GUA1P38625 525 aaKnown RBP10.41□□□□□ -0.74
NPL6YMR091C PIB1Q06651 286 aa10.4□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms