RNA–Protein interactions for RNA: YEL019C

MMS21, Transcript of SUMO ligase and component of the SMC5-SMC6 complex, yeastyeast

Gene MMS21, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MMS21YEL019C DRS1P32892 752 aaKnown RBP18.2■□□□□ 0.5
MMS21YEL019C MTC1P47018 478 aaKnown RBP18.06■□□□□ 0.48
MMS21YEL019C BFR2Q06631 534 aaKnown RBP15.75■□□□□ 0.11
MMS21YEL019C DIP2Q12220 943 aaPredicted RBP15.5■□□□□ 0.07
MMS21YEL019C AVT3P36062 692 aa15.26■□□□□ 0.03
MMS21YEL019C FAP1P53971 965 aa14.88□□□□□ -0.03
MMS21YEL019C TFA1P36100 482 aa14.79□□□□□ -0.04
MMS21YEL019C ISW2Q08773 1120 aa14.71□□□□□ -0.05
MMS21YEL019C RSE1Q04693 1361 aaKnown RBP14.61□□□□□ -0.07
MMS21YEL019C RPG1P38249 964 aaKnown RBP14.55□□□□□ -0.08
MMS21YEL019C PRI1P10363 409 aa14.51□□□□□ -0.09
MMS21YEL019C AAD16Q02895 342 aa14.28□□□□□ -0.12
MMS21YEL019C RPL17AP05740 184 aaKnown RBP14.08□□□□□ -0.16
MMS21YEL019C RPL17BP46990 184 aaKnown RBP14.08□□□□□ -0.16
MMS21YEL019C REB1P21538 810 aa13.91□□□□□ -0.18
MMS21YEL019C PRY3P47033 881 aa13.9□□□□□ -0.18
MMS21YEL019C TSR3Q12094 313 aaKnown RBP13.83□□□□□ -0.2
MMS21YEL019C SPT21P35209 758 aa13.49□□□□□ -0.25
MMS21YEL019C RIM101P33400 625 aa13.35□□□□□ -0.27
MMS21YEL019C MRPL32P25348 183 aa13.28□□□□□ -0.28
MMS21YEL019C YKR023WP36119 530 aaKnown RBP13.1□□□□□ -0.31
MMS21YEL019C YCK3P39962 524 aa13.1□□□□□ -0.31
MMS21YEL019C HAA1Q12753 694 aaKnown RBP13.09□□□□□ -0.31
MMS21YEL019C PTP3P40048 928 aa12.96□□□□□ -0.33
MMS21YEL019C OXP1P28273 1286 aa12.95□□□□□ -0.34
MMS21YEL019C HOP09932 586 aa12.87□□□□□ -0.35
MMS21YEL019C YIL055CP40523 627 aaKnown RBP12.82□□□□□ -0.36
MMS21YEL019C TFC8Q12308 588 aa12.82□□□□□ -0.36
MMS21YEL019C CDC27P38042 758 aa12.81□□□□□ -0.36
MMS21YEL019C YAH1Q12184 172 aaKnown RBP12.81□□□□□ -0.36
MMS21YEL019C SSP1P38871 571 aa12.78□□□□□ -0.36
MMS21YEL019C DCD1P06773 312 aa12.77□□□□□ -0.37
MMS21YEL019C YLR271WQ06152 274 aa12.6□□□□□ -0.39
MMS21YEL019C RSM7P47150 247 aa12.58□□□□□ -0.4
MMS21YEL019C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.58□□□□□ -0.4not detected
MMS21YEL019C RQC2Q12532 1038 aaKnown RBP12.56□□□□□ -0.4
MMS21YEL019C BCH2P36122 765 aa12.47□□□□□ -0.41
MMS21YEL019C YGL015CP33199 130 aa12.37□□□□□ -0.43
MMS21YEL019C AI2P03876 854 aa12.36□□□□□ -0.43
MMS21YEL019C MGA2P40578 1113 aa12.31□□□□□ -0.44
MMS21YEL019C BBC1P47068 1157 aa12.28□□□□□ -0.44
MMS21YEL019C SCY1P53009 804 aa12.28□□□□□ -0.44
MMS21YEL019C MAP2P38174 421 aaKnown RBP12.27□□□□□ -0.45
MMS21YEL019C DMA1P38823 416 aa12.25□□□□□ -0.45
MMS21YEL019C EPS1P40557 701 aa12.25□□□□□ -0.45
MMS21YEL019C UBP10P53874 792 aaPredicted RBP12.24□□□□□ -0.45
MMS21YEL019C PSD2P53037 1138 aaKnown RBP12.22□□□□□ -0.45
MMS21YEL019C CST9Q06032 482 aa12.22□□□□□ -0.45
MMS21YEL019C BDF1P35817 686 aa12.16□□□□□ -0.46
MMS21YEL019C SLX5P32828 619 aaKnown RBP12.02□□□□□ -0.49
MMS21YEL019C MRM1P25270 412 aa11.99□□□□□ -0.49
MMS21YEL019C RTG3P38165 486 aa11.82□□□□□ -0.52
MMS21YEL019C RCR1P38212 213 aa11.8□□□□□ -0.52
MMS21YEL019C TIF4632P39936 914 aaKnown RBP11.77□□□□□ -0.53
MMS21YEL019C RAM2P29703 316 aa11.76□□□□□ -0.53
MMS21YEL019C TGL3P40308 642 aa11.69□□□□□ -0.54
MMS21YEL019C VPS29P38759 282 aa11.67□□□□□ -0.54
MMS21YEL019C YMR1P47147 688 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
MMS21YEL019C MAK11P20484 414 aaKnown RBP11.56□□□□□ -0.56
MMS21YEL019C SET1P38827 1080 aaKnown RBP11.54□□□□□ -0.56
MMS21YEL019C DBP1P24784 617 aaKnown RBP11.52□□□□□ -0.57
MMS21YEL019C YFR006WP43590 535 aa11.52□□□□□ -0.57
MMS21YEL019C YOR238WQ08634 303 aa11.52□□□□□ -0.57
MMS21YEL019C SAS10Q12136 610 aaPredicted RBP11.51□□□□□ -0.57
MMS21YEL019C STS1P38637 319 aa11.5□□□□□ -0.57
MMS21YEL019C YAP5P40574 245 aa11.5□□□□□ -0.57
MMS21YEL019C NSR1P27476 414 aaKnown RBP RIP-Chip data11.48□□□□□ -0.57not detected
MMS21YEL019C PIB1Q06651 286 aa11.47□□□□□ -0.57
MMS21YEL019C COQ8P27697 501 aa11.42□□□□□ -0.58
MMS21YEL019C MIF2P35201 549 aa11.41□□□□□ -0.58
MMS21YEL019C VPS70P47161 811 aa11.33□□□□□ -0.6
MMS21YEL019C EDS1P38073 919 aa11.32□□□□□ -0.6
MMS21YEL019C IFH1P39520 1085 aa11.32□□□□□ -0.6
MMS21YEL019C MST1P07236 462 aa11.31□□□□□ -0.6
MMS21YEL019C YPR148CQ06523 435 aa11.29□□□□□ -0.6
MMS21YEL019C NOP53Q12080 455 aaKnown RBP11.28□□□□□ -0.6
MMS21YEL019C VMA1P17255 1071 aaKnown RBP11.27□□□□□ -0.61
MMS21YEL019C PTC3P34221 468 aaKnown RBP11.24□□□□□ -0.61
MMS21YEL019C GTT3P39996 337 aa11.23□□□□□ -0.61
MMS21YEL019C CKB1P43639 278 aa11.22□□□□□ -0.61
MMS21YEL019C SPB4P25808 606 aaPredicted RBP11.18□□□□□ -0.62
MMS21YEL019C SAM3Q08986 587 aa11.13□□□□□ -0.63
MMS21YEL019C ATH1P48016 1211 aa11.11□□□□□ -0.63
MMS21YEL019C GRE2Q12068 342 aaKnown RBP11.11□□□□□ -0.63
MMS21YEL019C LEU3P08638 886 aa11.1□□□□□ -0.63
MMS21YEL019C GYP5Q12344 894 aa11.09□□□□□ -0.63
MMS21YEL019C WSC3Q12215 556 aa11.07□□□□□ -0.64
MMS21YEL019C GUT1P32190 709 aa11.06□□□□□ -0.64
MMS21YEL019C PBS2P08018 668 aa11.05□□□□□ -0.64
MMS21YEL019C LEO1P38439 464 aa11.05□□□□□ -0.64
MMS21YEL019C REF2P42073 533 aaPredicted RBP11.05□□□□□ -0.64
MMS21YEL019C SET4P42948 560 aa11.04□□□□□ -0.64
MMS21YEL019C YOL036WQ08206 761 aa11.04□□□□□ -0.64
MMS21YEL019C DCW1P36091 449 aa11□□□□□ -0.65
MMS21YEL019C YBL029C-AQ3E756 94 aa10.97□□□□□ -0.65
MMS21YEL019C DSF2P38213 736 aa10.96□□□□□ -0.65
MMS21YEL019C UBP9P39967 754 aa10.96□□□□□ -0.65
MMS21YEL019C MSB4Q12317 492 aa10.94□□□□□ -0.66
MMS21YEL019C ABP1P15891 592 aaKnown RBP10.93□□□□□ -0.66
MMS21YEL019C VHR2P40041 505 aa10.93□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms