Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 AC024257.2-201ENST00000549699 147 ntBASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 AL449106.1-201ENST00000608517 1980 ntBASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 MIR6821-201ENST00000617625 74 ntBASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.1■■□□□ 1.93
PTCH2Q9Y6C5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PTCH2Q9Y6C5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PTCH2Q9Y6C5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PTCH2Q9Y6C5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.07■■□□□ 1.92
PTCH2Q9Y6C5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PTCH2Q9Y6C5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
PTCH2Q9Y6C5 AF131216.4-201ENST00000638924 1588 ntBASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PTCH2Q9Y6C5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AL162430.1-201ENST00000480705 870 ntBASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AL136967.2-201ENST00000623968 743 ntBASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.04■■□□□ 1.92
PTCH2Q9Y6C5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 AC097381.1-201ENST00000429019 1296 ntBASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 AF213884.3-201ENST00000563833 479 ntBASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 AC087623.3-201ENST00000607047 1098 ntBASIC27.03■■□□□ 1.92
PTCH2Q9Y6C5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PTCH2Q9Y6C5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCH2Q9Y6C5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PTCH2Q9Y6C5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 BX255925.1-201ENST00000566954 1854 ntBASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PTCH2Q9Y6C5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 SRD5A1P1-201ENST00000442297 786 ntBASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
PTCH2Q9Y6C5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.97■■□□□ 1.91
PTCH2Q9Y6C5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 MIR939-201ENST00000401314 82 ntBASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
PTCH2Q9Y6C5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.91
PTCH2Q9Y6C5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PTCH2Q9Y6C5 AP001330.3-201ENST00000520123 633 ntBASIC26.94■■□□□ 1.9
PTCH2Q9Y6C5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTCH2Q9Y6C5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
PTCH2Q9Y6C5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.93■■□□□ 1.9
PTCH2Q9Y6C5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms