Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF407Q9C0G0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF407Q9C0G0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
ZNF407Q9C0G0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF407Q9C0G0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF407Q9C0G0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF407Q9C0G0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF407Q9C0G0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF407Q9C0G0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF407Q9C0G0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF407Q9C0G0 KRT16P3-201ENST00000439127 1283 ntBASIC21.33■■□□□ 1.01
ZNF407Q9C0G0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
ZNF407Q9C0G0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.33■■□□□ 1.01
ZNF407Q9C0G0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF407Q9C0G0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ZNF407Q9C0G0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.33■■□□□ 1
ZNF407Q9C0G0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF407Q9C0G0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF407Q9C0G0 AC010501.1-201ENST00000606270 1962 ntBASIC21.32■■□□□ 1
ZNF407Q9C0G0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.32■■□□□ 1
ZNF407Q9C0G0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF407Q9C0G0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
ZNF407Q9C0G0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.32■■□□□ 1
ZNF407Q9C0G0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.32■■□□□ 1
ZNF407Q9C0G0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.32■■□□□ 1
ZNF407Q9C0G0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF407Q9C0G0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 AC011551.1-201ENST00000614101 683 ntBASIC21.31■■□□□ 1
ZNF407Q9C0G0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF407Q9C0G0 AC021242.3-201ENST00000607598 1377 ntBASIC21.31■■□□□ 1
ZNF407Q9C0G0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ZNF407Q9C0G0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.3■■□□□ 1
ZNF407Q9C0G0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF407Q9C0G0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF407Q9C0G0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.3■■□□□ 1
ZNF407Q9C0G0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF407Q9C0G0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF407Q9C0G0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ZNF407Q9C0G0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.3■■□□□ 1
ZNF407Q9C0G0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF407Q9C0G0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF407Q9C0G0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.29■■□□□ 1
ZNF407Q9C0G0 AC092028.1-203ENST00000608262 953 ntBASIC21.29■■□□□ 1
ZNF407Q9C0G0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF407Q9C0G0 AC092803.2-201ENST00000564287 1899 ntBASIC21.29■■□□□ 1
ZNF407Q9C0G0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF407Q9C0G0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ZNF407Q9C0G0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZNF407Q9C0G0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
ZNF407Q9C0G0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.28■■□□□ 1
ZNF407Q9C0G0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF407Q9C0G0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF407Q9C0G0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF407Q9C0G0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF407Q9C0G0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF407Q9C0G0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.28■■□□□ 1
ZNF407Q9C0G0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZNF407Q9C0G0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.27■■□□□ 1
ZNF407Q9C0G0 AC131281.2-201ENST00000520478 145 ntBASIC21.27■■□□□ 1
ZNF407Q9C0G0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.27■■□□□ 1
ZNF407Q9C0G0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.27■■□□□ 1
ZNF407Q9C0G0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF407Q9C0G0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZNF407Q9C0G0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.27■■□□□ 1
ZNF407Q9C0G0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF407Q9C0G0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 AF131216.4-201ENST00000638924 1588 ntBASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.25■□□□□ 0.99
ZNF407Q9C0G0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF407Q9C0G0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms