Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SNRNP40Q96DI7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.45■■□□□ 1.02
SNRNP40Q96DI7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP40Q96DI7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP40Q96DI7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP40Q96DI7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRNP40Q96DI7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SNRNP40Q96DI7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP40Q96DI7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.42■■□□□ 1.02
SNRNP40Q96DI7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP40Q96DI7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP40Q96DI7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP40Q96DI7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP40Q96DI7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP40Q96DI7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.4■■□□□ 1.02
SNRNP40Q96DI7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SNRNP40Q96DI7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP40Q96DI7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 AF131216.4-201ENST00000638924 1588 ntBASIC21.39■■□□□ 1.01
SNRNP40Q96DI7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP40Q96DI7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP40Q96DI7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SNRNP40Q96DI7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.38■■□□□ 1.01
SNRNP40Q96DI7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP40Q96DI7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNRNP40Q96DI7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.37■■□□□ 1.01
SNRNP40Q96DI7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNRNP40Q96DI7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SNRNP40Q96DI7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 PBX2P1-201ENST00000493219 1291 ntBASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRNP40Q96DI7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP40Q96DI7 AC106739.1-201ENST00000617035 715 ntBASIC21.35■■□□□ 1.01
SNRNP40Q96DI7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.35■■□□□ 1.01
SNRNP40Q96DI7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRNP40Q96DI7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.35■■□□□ 1.01
SNRNP40Q96DI7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 ZNRF2P3-201ENST00000424200 374 ntBASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRNP40Q96DI7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.33■■□□□ 1.01
SNRNP40Q96DI7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.33■■□□□ 1.01
SNRNP40Q96DI7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.33■■□□□ 1.01
SNRNP40Q96DI7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
SNRNP40Q96DI7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
SNRNP40Q96DI7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.33■■□□□ 1
SNRNP40Q96DI7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNRNP40Q96DI7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP40Q96DI7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRNP40Q96DI7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRNP40Q96DI7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
SNRNP40Q96DI7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SNRNP40Q96DI7 AC142381.2-201ENST00000566120 298 ntBASIC21.31■■□□□ 1
SNRNP40Q96DI7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms