Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB39BQ96DA2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 AC091060.1-201ENST00000623524 1766 ntBASIC20.04■□□□□ 0.8
RAB39BQ96DA2 AC103834.1-201ENST00000520383 144 ntBASIC20.04■□□□□ 0.8
RAB39BQ96DA2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB39BQ96DA2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB39BQ96DA2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB39BQ96DA2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB39BQ96DA2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB39BQ96DA2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RAB39BQ96DA2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RAB39BQ96DA2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB39BQ96DA2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB39BQ96DA2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 LONRF2P2-201ENST00000439212 571 ntBASIC20.01■□□□□ 0.79
RAB39BQ96DA2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 AL031848.2-201ENST00000607670 837 ntBASIC20.01■□□□□ 0.79
RAB39BQ96DA2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB39BQ96DA2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB39BQ96DA2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB39BQ96DA2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20■□□□□ 0.79
RAB39BQ96DA2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 AC009299.2-201ENST00000482477 511 ntBASIC19.99■□□□□ 0.79
RAB39BQ96DA2 AC022616.5-201ENST00000518796 181 ntBASIC19.99■□□□□ 0.79
RAB39BQ96DA2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB39BQ96DA2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 AC103724.3-201ENST00000564481 992 ntBASIC19.98■□□□□ 0.79
RAB39BQ96DA2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB39BQ96DA2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 AC092803.2-201ENST00000564287 1899 ntBASIC19.97■□□□□ 0.79
RAB39BQ96DA2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 AC145676.1-201ENST00000514988 2004 ntBASIC19.97■□□□□ 0.79
RAB39BQ96DA2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB39BQ96DA2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAB39BQ96DA2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB39BQ96DA2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.96■□□□□ 0.79
RAB39BQ96DA2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms