Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZNF428Q96B54 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
ZNF428Q96B54 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZNF428Q96B54 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZNF428Q96B54 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.5■■■□□ 2.47
ZNF428Q96B54 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ZNF428Q96B54 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
ZNF428Q96B54 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZNF428Q96B54 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
ZNF428Q96B54 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
ZNF428Q96B54 SLC6A10P-202ENST00000431994 2058 ntBASIC30.49■■■□□ 2.47
ZNF428Q96B54 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ZNF428Q96B54 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.48■■■□□ 2.47
ZNF428Q96B54 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ZNF428Q96B54 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.48■■■□□ 2.47
ZNF428Q96B54 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
ZNF428Q96B54 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ZNF428Q96B54 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
ZNF428Q96B54 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.48■■■□□ 2.47
ZNF428Q96B54 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ZNF428Q96B54 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.47■■■□□ 2.47
ZNF428Q96B54 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ZNF428Q96B54 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
ZNF428Q96B54 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.47■■■□□ 2.47
ZNF428Q96B54 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.47■■■□□ 2.47
ZNF428Q96B54 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.47■■■□□ 2.47
ZNF428Q96B54 AC019171.1-201ENST00000601251 1056 ntBASIC30.47■■■□□ 2.47
ZNF428Q96B54 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ZNF428Q96B54 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ZNF428Q96B54 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.46■■■□□ 2.47
ZNF428Q96B54 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ZNF428Q96B54 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.46■■■□□ 2.47
ZNF428Q96B54 LONRF2P2-201ENST00000439212 571 ntBASIC30.46■■■□□ 2.47
ZNF428Q96B54 MIR4508-201ENST00000584178 70 ntBASIC30.46■■■□□ 2.47
ZNF428Q96B54 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZNF428Q96B54 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ZNF428Q96B54 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZNF428Q96B54 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ZNF428Q96B54 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ZNF428Q96B54 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.45■■■□□ 2.47
ZNF428Q96B54 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.45■■■□□ 2.47
ZNF428Q96B54 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
ZNF428Q96B54 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.45■■■□□ 2.47
ZNF428Q96B54 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ZNF428Q96B54 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ZNF428Q96B54 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
ZNF428Q96B54 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
ZNF428Q96B54 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.45■■■□□ 2.46
ZNF428Q96B54 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ZNF428Q96B54 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
ZNF428Q96B54 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZNF428Q96B54 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
ZNF428Q96B54 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZNF428Q96B54 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZNF428Q96B54 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ZNF428Q96B54 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.43■■■□□ 2.46
ZNF428Q96B54 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.43■■■□□ 2.46
ZNF428Q96B54 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ZNF428Q96B54 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ZNF428Q96B54 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZNF428Q96B54 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ZNF428Q96B54 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZNF428Q96B54 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ZNF428Q96B54 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ZNF428Q96B54 FOXO3B-201ENST00000395675 1928 ntBASIC30.41■■■□□ 2.46
ZNF428Q96B54 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.41■■■□□ 2.46
ZNF428Q96B54 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.41■■■□□ 2.46
ZNF428Q96B54 AL031848.2-201ENST00000607670 837 ntBASIC30.41■■■□□ 2.46
ZNF428Q96B54 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
ZNF428Q96B54 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZNF428Q96B54 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZNF428Q96B54 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ZNF428Q96B54 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
ZNF428Q96B54 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ZNF428Q96B54 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ZNF428Q96B54 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ZNF428Q96B54 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ZNF428Q96B54 AC022211.4-201ENST00000625094 2161 ntBASIC30.39■■■□□ 2.46
ZNF428Q96B54 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.39■■■□□ 2.46
ZNF428Q96B54 AC142381.3-201ENST00000568208 1670 ntBASIC30.39■■■□□ 2.45
ZNF428Q96B54 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZNF428Q96B54 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ZNF428Q96B54 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.38■■■□□ 2.45
ZNF428Q96B54 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZNF428Q96B54 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZNF428Q96B54 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZNF428Q96B54 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.38■■■□□ 2.45
ZNF428Q96B54 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZNF428Q96B54 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZNF428Q96B54 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZNF428Q96B54 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.37■■■□□ 2.45
ZNF428Q96B54 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZNF428Q96B54 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
ZNF428Q96B54 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZNF428Q96B54 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.37■■■□□ 2.45
ZNF428Q96B54 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZNF428Q96B54 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZNF428Q96B54 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.36■■■□□ 2.45
ZNF428Q96B54 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZNF428Q96B54 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms