Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 AC012354.3-201ENST00000623734 483 ntBASIC20.46■□□□□ 0.87
SLC25A28Q96A46 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A28Q96A46 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.45■□□□□ 0.87
SLC25A28Q96A46 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
SLC25A28Q96A46 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC25A28Q96A46 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A28Q96A46 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A28Q96A46 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 AC141586.4-201ENST00000624558 1573 ntBASIC20.41■□□□□ 0.86
SLC25A28Q96A46 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A28Q96A46 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A28Q96A46 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A28Q96A46 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A28Q96A46 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC25A28Q96A46 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SLC25A28Q96A46 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A28Q96A46 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A28Q96A46 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 AC060814.1-201ENST00000554326 538 ntBASIC20.38■□□□□ 0.85
SLC25A28Q96A46 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A28Q96A46 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A28Q96A46 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A28Q96A46 AC012676.1-201ENST00000574705 1949 ntBASIC20.37■□□□□ 0.85
SLC25A28Q96A46 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC25A28Q96A46 AC126177.7-201ENST00000547904 679 ntBASIC20.37■□□□□ 0.85
SLC25A28Q96A46 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A28Q96A46 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A28Q96A46 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms