Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
KRTCAP3Q53RY4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.27■■□□□ 1
KRTCAP3Q53RY4 MIR3621-201ENST00000580529 85 ntBASIC21.27■■□□□ 1
KRTCAP3Q53RY4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.27■■□□□ 1
KRTCAP3Q53RY4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.27■■□□□ 1
KRTCAP3Q53RY4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.27■□□□□ 0.99
KRTCAP3Q53RY4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
KRTCAP3Q53RY4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRTCAP3Q53RY4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 AL117332.1-201ENST00000622628 974 ntBASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 FOXO3B-201ENST00000395675 1928 ntBASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KRTCAP3Q53RY4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 AC131281.2-201ENST00000520478 145 ntBASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.24■□□□□ 0.99
KRTCAP3Q53RY4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRTCAP3Q53RY4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KRTCAP3Q53RY4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRTCAP3Q53RY4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.23■□□□□ 0.99
KRTCAP3Q53RY4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.23■□□□□ 0.99
KRTCAP3Q53RY4 AL139246.5-201ENST00000606645 996 ntBASIC21.23■□□□□ 0.99
KRTCAP3Q53RY4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.22■□□□□ 0.99
KRTCAP3Q53RY4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 AL136116.3-201ENST00000402907 1138 ntBASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.21■□□□□ 0.99
KRTCAP3Q53RY4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.2■□□□□ 0.99
KRTCAP3Q53RY4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRTCAP3Q53RY4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.2■□□□□ 0.98
KRTCAP3Q53RY4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.2■□□□□ 0.98
KRTCAP3Q53RY4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRTCAP3Q53RY4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRTCAP3Q53RY4 AF131216.4-201ENST00000638924 1588 ntBASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 MIR638-201ENST00000385237 100 ntBASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRTCAP3Q53RY4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.18■□□□□ 0.98
KRTCAP3Q53RY4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
KRTCAP3Q53RY4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRTCAP3Q53RY4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KRTCAP3Q53RY4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.17■□□□□ 0.98
KRTCAP3Q53RY4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRTCAP3Q53RY4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 AC090877.2-201ENST00000558441 1738 ntBASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms