Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
UBE2AP49459 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.84□□□□□ -0.03
UBE2AP49459 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
UBE2AP49459 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC14.84□□□□□ -0.03
UBE2AP49459 HES4-202ENST00000428771 1040 ntTSL 2 BASIC14.84□□□□□ -0.03
UBE2AP49459 AL157400.5-201ENST00000507624 621 ntBASIC14.84□□□□□ -0.03
UBE2AP49459 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.84□□□□□ -0.03
UBE2AP49459 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBE2AP49459 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.83□□□□□ -0.03
UBE2AP49459 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBE2AP49459 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 ECEL1P2-201ENST00000461596 1295 ntBASIC14.83□□□□□ -0.04
UBE2AP49459 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
UBE2AP49459 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.83□□□□□ -0.04
UBE2AP49459 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
UBE2AP49459 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2AP49459 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
UBE2AP49459 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2AP49459 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 AC025884.2-201ENST00000553429 711 ntBASIC14.82□□□□□ -0.04
UBE2AP49459 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 CEBPA-AS1-201ENST00000592982 2198 ntBASIC14.82□□□□□ -0.04
UBE2AP49459 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2AP49459 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBE2AP49459 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBE2AP49459 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBE2AP49459 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2AP49459 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2AP49459 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2AP49459 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC14.81□□□□□ -0.04
UBE2AP49459 MIR4449-201ENST00000578365 66 ntBASIC14.81□□□□□ -0.04
UBE2AP49459 AC092296.2-201ENST00000589470 999 ntBASIC14.81□□□□□ -0.04
UBE2AP49459 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2AP49459 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBE2AP49459 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2AP49459 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2AP49459 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2AP49459 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
UBE2AP49459 RP9P-202ENST00000450133 1212 ntBASIC14.8□□□□□ -0.04
UBE2AP49459 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2AP49459 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2AP49459 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBE2AP49459 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
UBE2AP49459 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2AP49459 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC14.8□□□□□ -0.04
UBE2AP49459 AC096887.2-201ENST00000623443 1957 ntBASIC14.8□□□□□ -0.04
UBE2AP49459 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBE2AP49459 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBE2AP49459 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2AP49459 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
UBE2AP49459 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.79□□□□□ -0.04
UBE2AP49459 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2AP49459 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC14.79□□□□□ -0.04
UBE2AP49459 GPX1-201ENST00000419349 1106 ntBASIC14.79□□□□□ -0.04
UBE2AP49459 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.79□□□□□ -0.04
UBE2AP49459 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.79□□□□□ -0.04
UBE2AP49459 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBE2AP49459 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBE2AP49459 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.78□□□□□ -0.04
UBE2AP49459 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBE2AP49459 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC14.78□□□□□ -0.04
UBE2AP49459 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBE2AP49459 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC14.77□□□□□ -0.04
UBE2AP49459 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBE2AP49459 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
UBE2AP49459 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
UBE2AP49459 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 AC093536.1-201ENST00000569153 554 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms