Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP1A1P05023 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP1A1P05023 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.12■■□□□ 1.61
ATP1A1P05023 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.12■■□□□ 1.61
ATP1A1P05023 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.12■■□□□ 1.61
ATP1A1P05023 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP1A1P05023 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.12■■□□□ 1.61
ATP1A1P05023 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.12■■□□□ 1.61
ATP1A1P05023 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP1A1P05023 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP1A1P05023 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP1A1P05023 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
ATP1A1P05023 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
ATP1A1P05023 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP1A1P05023 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.11■■□□□ 1.61
ATP1A1P05023 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
ATP1A1P05023 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP1A1P05023 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ATP1A1P05023 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP1A1P05023 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.1■■□□□ 1.61
ATP1A1P05023 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
ATP1A1P05023 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP1A1P05023 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.09■■□□□ 1.61
ATP1A1P05023 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.09■■□□□ 1.61
ATP1A1P05023 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP1A1P05023 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
ATP1A1P05023 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
ATP1A1P05023 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
ATP1A1P05023 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP1A1P05023 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP1A1P05023 AC141586.4-201ENST00000624558 1573 ntBASIC25.09■■□□□ 1.61
ATP1A1P05023 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
ATP1A1P05023 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATP1A1P05023 AC004812.2-201ENST00000611079 2094 ntBASIC25.08■■□□□ 1.61
ATP1A1P05023 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATP1A1P05023 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
ATP1A1P05023 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATP1A1P05023 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.6
ATP1A1P05023 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.07■■□□□ 1.6
ATP1A1P05023 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.07■■□□□ 1.6
ATP1A1P05023 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.07■■□□□ 1.6
ATP1A1P05023 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP1A1P05023 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP1A1P05023 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP1A1P05023 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP1A1P05023 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP1A1P05023 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.06■■□□□ 1.6
ATP1A1P05023 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
ATP1A1P05023 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP1A1P05023 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP1A1P05023 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ATP1A1P05023 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP1A1P05023 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.05■■□□□ 1.6
ATP1A1P05023 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATP1A1P05023 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ATP1A1P05023 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
ATP1A1P05023 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
ATP1A1P05023 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP1A1P05023 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
ATP1A1P05023 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP1A1P05023 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
ATP1A1P05023 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.04■■□□□ 1.6
ATP1A1P05023 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP1A1P05023 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP1A1P05023 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.04■■□□□ 1.6
ATP1A1P05023 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP1A1P05023 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP1A1P05023 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.03■■□□□ 1.6
ATP1A1P05023 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP1A1P05023 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATP1A1P05023 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATP1A1P05023 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ATP1A1P05023 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ATP1A1P05023 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP1A1P05023 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.02■■□□□ 1.6
ATP1A1P05023 DUSP8P5-201ENST00000422884 1815 ntBASIC25.02■■□□□ 1.6
ATP1A1P05023 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.02■■□□□ 1.6
ATP1A1P05023 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP1A1P05023 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP1A1P05023 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.01■■□□□ 1.59
ATP1A1P05023 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP1A1P05023 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
ATP1A1P05023 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.01■■□□□ 1.59
ATP1A1P05023 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25■■□□□ 1.59
ATP1A1P05023 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
ATP1A1P05023 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
ATP1A1P05023 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
ATP1A1P05023 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP1A1P05023 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms