Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.532e-6■□□□□ 8.9
CSTF2TQ9H0L4 USP11-203ENST00000377080 804 ntTSL 29.43□□□□□ -0.92e-6■□□□□ 8.9
CSTF2TQ9H0L4 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.962e-6■□□□□ 8.9
CSTF2TQ9H0L4 SHC2-203ENST00000588376 1551 ntTSL 1 (best)14.15□□□□□ -0.144e-8■□□□□ 8.9
CSTF2TQ9H0L4 BCR-215ENST00000487968 2870 ntTSL 210.47□□□□□ -0.732e-6■□□□□ 8.9
CSTF2TQ9H0L4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.221e-12■□□□□ 8.9
CSTF2TQ9H0L4 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.633e-8■□□□□ 8.9
CSTF2TQ9H0L4 SP3-204ENST00000462904 535 ntTSL 410.12□□□□□ -0.793e-8■□□□□ 8.9
CSTF2TQ9H0L4 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.833e-8■□□□□ 8.9
CSTF2TQ9H0L4 RPTOR-206ENST00000573746 688 ntTSL 28.93□□□□□ -0.983e-8■□□□□ 8.9
CSTF2TQ9H0L4 TMEM45B-204ENST00000527754 888 ntTSL 56.84□□□□□ -1.311e-12■□□□□ 8.9
CSTF2TQ9H0L4 TMEM45B-205ENST00000529381 515 ntTSL 26.19□□□□□ -1.421e-12■□□□□ 8.9
CSTF2TQ9H0L4 TMEM45B-203ENST00000525709 247 ntTSL 55.69□□□□□ -1.51e-12■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-212ENST00000615671 6266 nt18.37■□□□□ 0.533e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.48□□□□□ -0.253e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.48□□□□□ -0.253e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-208ENST00000558970 730 ntTSL 511.48□□□□□ -0.573e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.573e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC11.21□□□□□ -0.613e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC10.49□□□□□ -0.733e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.11□□□□□ -1.113e-8■□□□□ 8.9
CSTF2TQ9H0L4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.78□□□□□ -1.483e-8■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-206ENST00000507468 1486 ntTSL 1 (best)19.27■□□□□ 0.674e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-208ENST00000511722 638 ntTSL 416.99■□□□□ 0.314e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-204ENST00000503477 1478 ntTSL 215.2■□□□□ 0.024e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-205ENST00000504956 1668 ntTSL 214.61□□□□□ -0.074e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.394e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.774e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.224e-6■□□□□ 8.9
CSTF2TQ9H0L4 AFF1-207ENST00000511442 463 ntTSL 33.73□□□□□ -1.814e-6■□□□□ 8.9
CSTF2TQ9H0L4 BCL2L2-205ENST00000557236 631 ntTSL 518.73■□□□□ 0.591e-7■□□□□ 8.9
CSTF2TQ9H0L4 BCL2L2-204ENST00000556599 548 ntTSL 317.07■□□□□ 0.321e-7■□□□□ 8.9
CSTF2TQ9H0L4 BCL2L2-PABPN1-202ENST00000556100 655 ntTSL 312.55□□□□□ -0.41e-7■□□□□ 8.9
CSTF2TQ9H0L4 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.461e-7■□□□□ 8.9
CSTF2TQ9H0L4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.072e-9■□□□□ 8.9
CSTF2TQ9H0L4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.38□□□□□ -0.113e-6■□□□□ 8.9
CSTF2TQ9H0L4 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.343e-6■□□□□ 8.9
CSTF2TQ9H0L4 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.653e-6■□□□□ 8.9
CSTF2TQ9H0L4 PLEKHA7-209ENST00000529213 561 ntTSL 410.87□□□□□ -0.673e-6■□□□□ 8.9
CSTF2TQ9H0L4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.28■■□□□ 1.642e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.052e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-208ENST00000537143 519 ntTSL 221.42■■□□□ 1.022e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-219ENST00000542908 1178 ntTSL 221.42■■□□□ 1.022e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.13■□□□□ 0.972e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATP2A2-203ENST00000377685 5702 ntTSL 520.77■□□□□ 0.912e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-202ENST00000435507 2254 ntTSL 219.91■□□□□ 0.782e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-206ENST00000598273 2437 ntTSL 216.57■□□□□ 0.242e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-211ENST00000599874 636 ntTSL 215.39■□□□□ 0.052e-6■□□□□ 8.9
CSTF2TQ9H0L4 ANO9-205ENST00000526142 2868 ntTSL 215.3■□□□□ 0.042e-6■□□□□ 8.9
CSTF2TQ9H0L4 ANO9-208ENST00000534161 2158 ntTSL 215.14■□□□□ 0.012e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-213ENST00000601419 717 ntTSL 215.11■□□□□ 0.012e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.072e-6■□□□□ 8.9
CSTF2TQ9H0L4 MLLT6-201ENST00000611305 483 ntTSL 214.57□□□□□ -0.082e-6■□□□□ 8.9
CSTF2TQ9H0L4 C2-217ENST00000497706 1609 ntTSL 514.05□□□□□ -0.162e-6■□□□□ 8.9
CSTF2TQ9H0L4 PPFIA1-225ENST00000638133 814 ntTSL 314.04□□□□□ -0.162e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.97□□□□□ -0.172e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-220ENST00000544490 3731 ntTSL 213.94□□□□□ -0.182e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-209ENST00000599590 572 ntTSL 413.6□□□□□ -0.232e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.242e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.58□□□□□ -0.242e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATG16L2-203ENST00000439504 3841 ntTSL 1 (best)12.53□□□□□ -0.42e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-208ENST00000599302 636 ntTSL 312.52□□□□□ -0.412e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.412e-6■□□□□ 8.9
CSTF2TQ9H0L4 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.49□□□□□ -0.412e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.452e-6■□□□□ 8.9
CSTF2TQ9H0L4 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC11.84□□□□□ -0.512e-6■□□□□ 8.9
CSTF2TQ9H0L4 C2-208ENST00000452202 539 ntTSL 411.83□□□□□ -0.522e-6■□□□□ 8.9
CSTF2TQ9H0L4 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.47□□□□□ -0.572e-6■□□□□ 8.9
CSTF2TQ9H0L4 SELENOW-203ENST00000595509 675 ntTSL 311.03□□□□□ -0.642e-6■□□□□ 8.9
CSTF2TQ9H0L4 MLLT6-203ENST00000614769 657 ntTSL 29.27□□□□□ -0.932e-6■□□□□ 8.9
CSTF2TQ9H0L4 PPFIA1-219ENST00000531657 3036 ntTSL 28.46□□□□□ -1.052e-6■□□□□ 8.9
CSTF2TQ9H0L4 PPFIA1-204ENST00000525922 358 ntTSL 37.36□□□□□ -1.232e-6■□□□□ 8.9
CSTF2TQ9H0L4 PPFIA1-215ENST00000530548 3774 ntTSL 27.13□□□□□ -1.272e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.74■□□□□ 0.113e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-211ENST00000542238 735 ntTSL 314.71□□□□□ -0.053e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-214ENST00000545432 545 ntTSL 414.03□□□□□ -0.163e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.49□□□□□ -0.413e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-207ENST00000536011 992 ntTSL 212.43□□□□□ -0.423e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-212ENST00000543123 712 ntTSL 212.43□□□□□ -0.423e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-213ENST00000543552 529 ntTSL 412.43□□□□□ -0.423e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC11.76□□□□□ -0.533e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-209ENST00000538995 814 ntTSL 210.85□□□□□ -0.673e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC10.75□□□□□ -0.693e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-208ENST00000537981 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.713e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC10.43□□□□□ -0.743e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-201ENST00000338850 493 ntTSL 210.05□□□□□ -0.83e-6■□□□□ 8.9
CSTF2TQ9H0L4 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.26□□□□□ -1.093e-6■□□□□ 8.9
CSTF2TQ9H0L4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.69■■□□□ 1.224e-8■□□□□ 8.9
CSTF2TQ9H0L4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.55■■□□□ 1.044e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-201ENST00000265344 1339 ntTSL 217.75■□□□□ 0.434e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.42■□□□□ 0.384e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-205ENST00000460983 597 ntTSL 417.33■□□□□ 0.364e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-209ENST00000498267 547 ntTSL 417.33■□□□□ 0.364e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-206ENST00000474988 1618 ntTSL 217.32■□□□□ 0.364e-8■□□□□ 8.9
CSTF2TQ9H0L4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.334e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.254e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-203ENST00000443316 406 ntTSL 216.36■□□□□ 0.214e-8■□□□□ 8.9
CSTF2TQ9H0L4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.064e-8■□□□□ 8.9
CSTF2TQ9H0L4 KCTD20-207ENST00000481911 1494 ntTSL 214.24□□□□□ -0.134e-8■□□□□ 8.9
Retrieved 100 of 19,151 protein–RNA pairs in 409.3 ms