RNA–Protein interactions for RNA: ENST00000507468.5

AFF1-206, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 1 (best)

Gene AFF1, Length 1,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-206ENST00000507468 NISCHQ9Y2I1 1504 aa49.79■■■■■ 5.56
AFF1-206ENST00000507468 CCDC180Q9P1Z9 1646 aa43.89■■■■■ 4.62
AFF1-206ENST00000507468 ABCC9O60706 1549 aa42.43■■■■■ 4.38
AFF1-206ENST00000507468 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
AFF1-206ENST00000507468 DCAF8L2P0C7V8 631 aa41.4■■■■■ 4.22
AFF1-206ENST00000507468 DCAF1Q9Y4B6 1507 aa41.19■■■■■ 4.19
AFF1-206ENST00000507468 NACADO15069 1562 aa41.15■■■■■ 4.18
AFF1-206ENST00000507468 MYO15BQ96JP2 1530 aa41.12■■■■■ 4.17
AFF1-206ENST00000507468 RB1CC1Q8TDY2 1594 aa41.03■■■■■ 4.16
AFF1-206ENST00000507468 SCRIBQ14160 1630 aa40.17■■■■■ 4.02
AFF1-206ENST00000507468 UNC13AQ9UPW8 1703 aa40.1■■■■■ 4.01
AFF1-206ENST00000507468 BICRAQ9NZM4 1560 aa39.82■■■■□ 3.96
AFF1-206ENST00000507468 PABPN1Q86U42 306 aaKnown RBP eCLIP39.81■■■■□ 3.96
AFF1-206ENST00000507468 SHROOM4Q9ULL8 1493 aa39.79■■■■□ 3.96
AFF1-206ENST00000507468 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.79
AFF1-206ENST00000507468 EIF4G1Q04637 1599 aaKnown RBP38.7■■■■□ 3.79
AFF1-206ENST00000507468 BAZ1AQ9NRL2 1556 aaPredicted RBP38.52■■■■□ 3.76
AFF1-206ENST00000507468 SMARCA4P51532 1647 aa38.47■■■■□ 3.75
AFF1-206ENST00000507468 DNAJC5BQ9UF47 199 aa38.42■■■■□ 3.74
AFF1-206ENST00000507468 MROH2BQ7Z745 1585 aa38.4■■■■□ 3.74
AFF1-206ENST00000507468 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
AFF1-206ENST00000507468 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
AFF1-206ENST00000507468 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
AFF1-206ENST00000507468 PEG3Q9GZU2 1588 aa38.08■■■■□ 3.69
AFF1-206ENST00000507468 SMARCA2P51531 1590 aa38.07■■■■□ 3.68
AFF1-206ENST00000507468 WIZO95785 1651 aa38.01■■■■□ 3.67
AFF1-206ENST00000507468 NCAPD3P42695 1498 aa38■■■■□ 3.67
AFF1-206ENST00000507468 HMGXB3Q12766 1538 aa37.83■■■■□ 3.65
AFF1-206ENST00000507468 BAZ1BQ9UIG0 1483 aaKnown RBP37.83■■■■□ 3.65
AFF1-206ENST00000507468 SUPT5HO00267 1087 aaKnown RBP37.77■■■■□ 3.64
AFF1-206ENST00000507468 TOP2AP11388 1531 aaKnown RBP37.62■■■■□ 3.61
AFF1-206ENST00000507468 CCDC88BA6NC98 1476 aa37.22■■■■□ 3.55
AFF1-206ENST00000507468 CADPSQ9ULU8 1353 aa36.94■■■■□ 3.5
AFF1-206ENST00000507468 NESP48681 1621 aa36.92■■■■□ 3.5
AFF1-206ENST00000507468 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
AFF1-206ENST00000507468 CFTRP13569 1480 aa36.85■■■■□ 3.49
AFF1-206ENST00000507468 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
AFF1-206ENST00000507468 PRDM2Q13029 1718 aa36.53■■■■□ 3.44
AFF1-206ENST00000507468 FANCD2Q9BXW9 1451 aa36.51■■■■□ 3.43
AFF1-206ENST00000507468 ERCC6Q03468 1493 aa36.49■■■■□ 3.43
AFF1-206ENST00000507468 KIF21AQ7Z4S6 1674 aa36.44■■■■□ 3.42
AFF1-206ENST00000507468 CEP164Q9UPV0 1460 aa36.38■■■■□ 3.41
AFF1-206ENST00000507468 MRC2Q9UBG0 1479 aa36.19■■■■□ 3.38
AFF1-206ENST00000507468 THOC2Q8NI27 1593 aaKnown RBP36.16■■■■□ 3.38
AFF1-206ENST00000507468 URB2Q14146 1524 aaKnown RBP36.11■■■■□ 3.37
AFF1-206ENST00000507468 ABCC8Q09428 1581 aa36.06■■■■□ 3.36
AFF1-206ENST00000507468 WDR62O43379 1518 aa36.05■■■■□ 3.36
AFF1-206ENST00000507468 TOPBP1Q92547 1522 aa36■■■■□ 3.35
AFF1-206ENST00000507468 WRNQ14191 1432 aaPredicted RBP eCLIP35.99■■■■□ 3.35
AFF1-206ENST00000507468 DNMBPQ6XZF7 1577 aa35.98■■■■□ 3.35
AFF1-206ENST00000507468 CUX1P39880 1505 aa35.98■■■■□ 3.35
AFF1-206ENST00000507468 SYNJ1O43426 1573 aa35.86■■■■□ 3.33
AFF1-206ENST00000507468 CUX2O14529 1486 aa35.84■■■■□ 3.33
AFF1-206ENST00000507468 TOP2BQ02880 1626 aa35.81■■■■□ 3.32
AFF1-206ENST00000507468 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
AFF1-206ENST00000507468 POLA1P09884 1462 aaPredicted RBP35.75■■■■□ 3.31
AFF1-206ENST00000507468 FGD5Q6ZNL6 1462 aa35.75■■■■□ 3.31
AFF1-206ENST00000507468 CHIC1Q5VXU3 224 aa35.64■■■■□ 3.3
AFF1-206ENST00000507468 SOGA1O94964 1423 aa35.62■■■■□ 3.29
AFF1-206ENST00000507468 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
AFF1-206ENST00000507468 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
AFF1-206ENST00000507468 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
AFF1-206ENST00000507468 TARBP1Q13395 1621 aaKnown RBP35.54■■■■□ 3.28
AFF1-206ENST00000507468 ABCA10Q8WWZ4 1543 aa35.43■■■■□ 3.26
AFF1-206ENST00000507468 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
AFF1-206ENST00000507468 WDR97A6NE52 1622 aa35.38■■■■□ 3.25
AFF1-206ENST00000507468 TDRD9Q8NDG6 1382 aaKnown RBP35.36■■■■□ 3.25
AFF1-206ENST00000507468 AQRO60306 1485 aaKnown RBP eCLIP35.31■■■■□ 3.243e-6■□□□□ 10.2
AFF1-206ENST00000507468 EIF4G3O43432 1585 aaKnown RBP35.26■■■■□ 3.24
AFF1-206ENST00000507468 ABCA5Q8WWZ7 1642 aa35.21■■■■□ 3.23
AFF1-206ENST00000507468 GAPVD1Q14C86 1478 aa35.2■■■■□ 3.23
AFF1-206ENST00000507468 KIF27Q86VH2 1401 aa35.18■■■■□ 3.22
AFF1-206ENST00000507468 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
AFF1-206ENST00000507468 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
AFF1-206ENST00000507468 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
AFF1-206ENST00000507468 IGF1RP08069 1367 aa35■■■■□ 3.19
AFF1-206ENST00000507468 ERICH3Q5RHP9 1530 aa34.99■■■■□ 3.19
AFF1-206ENST00000507468 SNAPC4Q5SXM2 1469 aa34.98■■■■□ 3.19
AFF1-206ENST00000507468 MAGI1Q96QZ7 1491 aaPredicted RBP34.92■■■■□ 3.18
AFF1-206ENST00000507468 EEA1Q15075 1411 aa34.92■■■■□ 3.18
AFF1-206ENST00000507468 FAM9AQ8IZU1 332 aaPredicted RBP34.9■■■■□ 3.18
AFF1-206ENST00000507468 CSRNP3Q8WYN3 585 aa34.84■■■■□ 3.17
AFF1-206ENST00000507468 ADAMTS12P58397 1594 aa34.82■■■■□ 3.16
AFF1-206ENST00000507468 FHAD1B1AJZ9 1412 aa34.82■■■■□ 3.16
AFF1-206ENST00000507468 SYNJ2O15056 1496 aa34.8■■■■□ 3.16
AFF1-206ENST00000507468 CARMIL1Q5VZK9 1371 aa34.79■■■■□ 3.16
AFF1-206ENST00000507468 CUL7Q14999 1698 aa34.77■■■■□ 3.16
AFF1-206ENST00000507468 FBLN2P98095 1184 aa34.77■■■■□ 3.16
AFF1-206ENST00000507468 CHMP7Q8WUX9 453 aaPredicted RBP34.76■■■■□ 3.15
AFF1-206ENST00000507468 PRXQ9BXM0 1461 aa34.69■■■■□ 3.14
AFF1-206ENST00000507468 CHD1O14646 1710 aa34.67■■■■□ 3.14
AFF1-206ENST00000507468 GRIN2AQ12879 1464 aa34.66■■■■□ 3.14
AFF1-206ENST00000507468 RAPGEF2Q9Y4G8 1499 aa34.63■■■■□ 3.13
AFF1-206ENST00000507468 OSCARQ8IYS5 282 aa34.53■■■■□ 3.12
AFF1-206ENST00000507468 KIF21BO75037 1637 aa34.5■■■■□ 3.11
AFF1-206ENST00000507468 NUP160Q12769 1436 aa34.48■■■■□ 3.11
AFF1-206ENST00000507468 CEP170Q5SW79 1584 aa34.46■■■■□ 3.11
AFF1-206ENST00000507468 EHMT2Q96KQ7 1210 aa34.41■■■■□ 3.1
AFF1-206ENST00000507468 GOLGA3Q08378 1498 aa34.37■■■■□ 3.09
AFF1-206ENST00000507468 CLASP1Q7Z460 1538 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms