RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
AFF1-202ENST00000395146 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
AFF1-202ENST00000395146 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
AFF1-202ENST00000395146 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
AFF1-202ENST00000395146 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
AFF1-202ENST00000395146 EHMT2Q96KQ7 1210 aa16.81■□□□□ 0.28
AFF1-202ENST00000395146 APLP2Q06481 763 aa16.76■□□□□ 0.27
AFF1-202ENST00000395146 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
AFF1-202ENST00000395146 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
AFF1-202ENST00000395146 CENPBP07199 599 aaPredicted RBP16.55■□□□□ 0.24
AFF1-202ENST00000395146 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
AFF1-202ENST00000395146 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
AFF1-202ENST00000395146 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
AFF1-202ENST00000395146 TTBK1Q5TCY1 1321 aaPredicted RBP16.34■□□□□ 0.21
AFF1-202ENST00000395146 MYT1Q01538 1121 aa16.27■□□□□ 0.2
AFF1-202ENST00000395146 ERICH6Q7L0X2 663 aa16.24■□□□□ 0.19
AFF1-202ENST00000395146 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
AFF1-202ENST00000395146 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
AFF1-202ENST00000395146 HRCP23327 699 aa16.07■□□□□ 0.16
AFF1-202ENST00000395146 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
AFF1-202ENST00000395146 NEFLP07196 543 aa16.06■□□□□ 0.16
AFF1-202ENST00000395146 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
AFF1-202ENST00000395146 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
AFF1-202ENST00000395146 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
AFF1-202ENST00000395146 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
AFF1-202ENST00000395146 LOC105371045A0A1W2PR82 267 aa15.69■□□□□ 0.1
AFF1-202ENST00000395146 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
AFF1-202ENST00000395146 DIEXFQ68CQ4 756 aaKnown RBP15.53■□□□□ 0.08
AFF1-202ENST00000395146 DAXXQ9UER7 740 aaPredicted RBP15.53■□□□□ 0.08
AFF1-202ENST00000395146 ITGAEP38570 1179 aa15.52■□□□□ 0.07
AFF1-202ENST00000395146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
AFF1-202ENST00000395146 POLR3GLQ9BT43 218 aa15.37■□□□□ 0.05
AFF1-202ENST00000395146 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
AFF1-202ENST00000395146 GTF3C3Q9Y5Q9 886 aa15.26■□□□□ 0.03
AFF1-202ENST00000395146 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
AFF1-202ENST00000395146 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
AFF1-202ENST00000395146 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
AFF1-202ENST00000395146 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
AFF1-202ENST00000395146 ANP32CO43423 234 aa15.13■□□□□ 0.01
AFF1-202ENST00000395146 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
AFF1-202ENST00000395146 CLSPNQ9HAW4 1339 aa15.11■□□□□ 0.01
AFF1-202ENST00000395146 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
AFF1-202ENST00000395146 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
AFF1-202ENST00000395146 CDK11AQ9UQ88 783 aaPredicted RBP15.08■□□□□ 0.01
AFF1-202ENST00000395146 BCANQ96GW7 911 aa15.07■□□□□ 0
AFF1-202ENST00000395146 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
AFF1-202ENST00000395146 ABCC9O60706 1549 aa15□□□□□ -0.01
AFF1-202ENST00000395146 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
AFF1-202ENST00000395146 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
AFF1-202ENST00000395146 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
AFF1-202ENST00000395146 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
AFF1-202ENST00000395146 ZNF326Q5BKZ1 582 aaKnown RBP14.89□□□□□ -0.03
AFF1-202ENST00000395146 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
AFF1-202ENST00000395146 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
AFF1-202ENST00000395146 CANXP27824 592 aaKnown RBP14.78□□□□□ -0.04
AFF1-202ENST00000395146 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
AFF1-202ENST00000395146 FKBP8Q14318 412 aa14.74□□□□□ -0.05
AFF1-202ENST00000395146 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
AFF1-202ENST00000395146 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
AFF1-202ENST00000395146 NEFMP07197 916 aa14.66□□□□□ -0.06
AFF1-202ENST00000395146 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
AFF1-202ENST00000395146 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
AFF1-202ENST00000395146 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
AFF1-202ENST00000395146 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
AFF1-202ENST00000395146 DDX10Q13206 875 aaKnown RBP14.61□□□□□ -0.07
AFF1-202ENST00000395146 FBLN2P98095 1184 aa14.6□□□□□ -0.07
AFF1-202ENST00000395146 ZNF777Q9ULD5 760 aaPredicted RBP14.57□□□□□ -0.08
AFF1-202ENST00000395146 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
AFF1-202ENST00000395146 CLIP1P30622 1438 aa14.55□□□□□ -0.08
AFF1-202ENST00000395146 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
AFF1-202ENST00000395146 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
AFF1-202ENST00000395146 FAM9BQ8IZU0 186 aa14.54□□□□□ -0.08
AFF1-202ENST00000395146 EEA1Q15075 1411 aa14.54□□□□□ -0.08
AFF1-202ENST00000395146 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
AFF1-202ENST00000395146 MIER1Q8N108 512 aa14.53□□□□□ -0.08
AFF1-202ENST00000395146 CCDC136Q96JN2 1154 aa14.51□□□□□ -0.09
AFF1-202ENST00000395146 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
AFF1-202ENST00000395146 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.47□□□□□ -0.09
AFF1-202ENST00000395146 TMC1Q8TDI8 760 aa14.46□□□□□ -0.09
AFF1-202ENST00000395146 CEP162Q5TB80 1403 aa14.46□□□□□ -0.09
AFF1-202ENST00000395146 MRS2Q9HD23 443 aa14.46□□□□□ -0.09
AFF1-202ENST00000395146 HSP90AA1P07900 732 aaKnown RBP14.46□□□□□ -0.1
AFF1-202ENST00000395146 BCL11AQ9H165 835 aa14.45□□□□□ -0.1
AFF1-202ENST00000395146 EIF5BO60841 1220 aaKnown RBP14.43□□□□□ -0.1
AFF1-202ENST00000395146 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
AFF1-202ENST00000395146 MTUS2Q5JR59 1369 aa14.42□□□□□ -0.1
AFF1-202ENST00000395146 GLIPR1L2Q4G1C9 344 aa14.41□□□□□ -0.1
AFF1-202ENST00000395146 RSF1Q96T23 1441 aaPredicted RBP14.4□□□□□ -0.1
AFF1-202ENST00000395146 NBR1Q14596 966 aa14.39□□□□□ -0.11
AFF1-202ENST00000395146 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
AFF1-202ENST00000395146 EIF4G2P78344 907 aaKnown RBP eCLIP14.38□□□□□ -0.118e-7■■■■■ 28.7
AFF1-202ENST00000395146 WDR43Q15061 677 aaKnown RBP eCLIP14.38□□□□□ -0.11
AFF1-202ENST00000395146 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
AFF1-202ENST00000395146 SALL2Q9Y467 1007 aaPredicted RBP14.33□□□□□ -0.12
AFF1-202ENST00000395146 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
AFF1-202ENST00000395146 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
AFF1-202ENST00000395146 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
AFF1-202ENST00000395146 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
AFF1-202ENST00000395146 IRX6P78412 446 aaPredicted RBP14.3□□□□□ -0.12
AFF1-202ENST00000395146 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms