RNA–Protein interactions for RNA: ENST00000503477.5

AFF1-204, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-204ENST00000503477 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
AFF1-204ENST00000503477 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
AFF1-204ENST00000503477 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
AFF1-204ENST00000503477 ABCC9O60706 1549 aa32.48■■■□□ 2.79
AFF1-204ENST00000503477 AEBP2Q6ZN18 517 aaPredicted RBP32.38■■■□□ 2.77
AFF1-204ENST00000503477 DCAF1Q9Y4B6 1507 aa32.27■■■□□ 2.76
AFF1-204ENST00000503477 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
AFF1-204ENST00000503477 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
AFF1-204ENST00000503477 NACADO15069 1562 aa31.92■■■□□ 2.7
AFF1-204ENST00000503477 RB1CC1Q8TDY2 1594 aa31.71■■■□□ 2.67
AFF1-204ENST00000503477 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
AFF1-204ENST00000503477 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
AFF1-204ENST00000503477 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
AFF1-204ENST00000503477 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
AFF1-204ENST00000503477 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
AFF1-204ENST00000503477 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
AFF1-204ENST00000503477 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
AFF1-204ENST00000503477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.1■■■□□ 2.41
AFF1-204ENST00000503477 RSF1Q96T23 1441 aaPredicted RBP29.99■■■□□ 2.39
AFF1-204ENST00000503477 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
AFF1-204ENST00000503477 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
AFF1-204ENST00000503477 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
AFF1-204ENST00000503477 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
AFF1-204ENST00000503477 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
AFF1-204ENST00000503477 WIZO95785 1651 aa29.69■■■□□ 2.34
AFF1-204ENST00000503477 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
AFF1-204ENST00000503477 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
AFF1-204ENST00000503477 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.31
AFF1-204ENST00000503477 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
AFF1-204ENST00000503477 NCAPD3P42695 1498 aa29.44■■■□□ 2.3
AFF1-204ENST00000503477 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
AFF1-204ENST00000503477 HMGXB3Q12766 1538 aa29.37■■■□□ 2.29
AFF1-204ENST00000503477 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
AFF1-204ENST00000503477 DNAJC5BQ9UF47 199 aa28.95■■■□□ 2.22
AFF1-204ENST00000503477 CFTRP13569 1480 aa28.66■■■□□ 2.18
AFF1-204ENST00000503477 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
AFF1-204ENST00000503477 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
AFF1-204ENST00000503477 PRDM2Q13029 1718 aa28.5■■■□□ 2.15
AFF1-204ENST00000503477 NESP48681 1621 aa28.38■■■□□ 2.13
AFF1-204ENST00000503477 PDS5BQ9NTI5 1447 aa28.29■■■□□ 2.12
AFF1-204ENST00000503477 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
AFF1-204ENST00000503477 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
AFF1-204ENST00000503477 TRIM41Q8WV44 630 aa28.26■■■□□ 2.11
AFF1-204ENST00000503477 WRNQ14191 1432 aaPredicted RBP eCLIP28.25■■■□□ 2.11
AFF1-204ENST00000503477 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
AFF1-204ENST00000503477 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
AFF1-204ENST00000503477 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
AFF1-204ENST00000503477 KIF21AQ7Z4S6 1674 aa28.08■■■□□ 2.09
AFF1-204ENST00000503477 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
AFF1-204ENST00000503477 CUX1P39880 1505 aa28.06■■■□□ 2.08
AFF1-204ENST00000503477 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
AFF1-204ENST00000503477 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
AFF1-204ENST00000503477 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
AFF1-204ENST00000503477 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
AFF1-204ENST00000503477 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
AFF1-204ENST00000503477 FGD5Q6ZNL6 1462 aa27.82■■■□□ 2.04
AFF1-204ENST00000503477 WDR62O43379 1518 aa27.79■■■□□ 2.04
AFF1-204ENST00000503477 THOC2Q8NI27 1593 aaKnown RBP27.76■■■□□ 2.03
AFF1-204ENST00000503477 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
AFF1-204ENST00000503477 EEA1Q15075 1411 aa27.74■■■□□ 2.03
AFF1-204ENST00000503477 SOGA1O94964 1423 aa27.7■■■□□ 2.02
AFF1-204ENST00000503477 SENP3Q9H4L4 574 aaPredicted RBP27.69■■■□□ 2.02
AFF1-204ENST00000503477 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
AFF1-204ENST00000503477 KIF27Q86VH2 1401 aa27.61■■■□□ 2.01
AFF1-204ENST00000503477 RAD54L2Q9Y4B4 1467 aa27.6■■■□□ 2.01
AFF1-204ENST00000503477 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
AFF1-204ENST00000503477 FAM9AQ8IZU1 332 aaPredicted RBP27.59■■■□□ 2.01
AFF1-204ENST00000503477 CUX2O14529 1486 aa27.57■■■□□ 2
AFF1-204ENST00000503477 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
AFF1-204ENST00000503477 WDR97A6NE52 1622 aa27.54■■■□□ 2
AFF1-204ENST00000503477 IFT140Q96RY7 1462 aa27.54■■■□□ 2
AFF1-204ENST00000503477 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
AFF1-204ENST00000503477 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
AFF1-204ENST00000503477 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
AFF1-204ENST00000503477 GAPVD1Q14C86 1478 aa27.37■■□□□ 1.97
AFF1-204ENST00000503477 IGF1RP08069 1367 aa27.36■■□□□ 1.97
AFF1-204ENST00000503477 KIF21BO75037 1637 aa27.34■■□□□ 1.97
AFF1-204ENST00000503477 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
AFF1-204ENST00000503477 PRXQ9BXM0 1461 aa27.31■■□□□ 1.96
AFF1-204ENST00000503477 LOC105371045A0A1W2PR82 267 aa27.31■■□□□ 1.96
AFF1-204ENST00000503477 PHF23Q9BUL5 403 aaPredicted RBP27.3■■□□□ 1.96
AFF1-204ENST00000503477 ZNF608Q9ULD9 1512 aaPredicted RBP27.29■■□□□ 1.96
AFF1-204ENST00000503477 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.963e-6■□□□□ 10.2
AFF1-204ENST00000503477 GOLGA3Q08378 1498 aa27.26■■□□□ 1.95
AFF1-204ENST00000503477 CUL7Q14999 1698 aa27.25■■□□□ 1.95
AFF1-204ENST00000503477 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
AFF1-204ENST00000503477 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
AFF1-204ENST00000503477 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
AFF1-204ENST00000503477 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
AFF1-204ENST00000503477 RAPGEF2Q9Y4G8 1499 aa27.18■■□□□ 1.94
AFF1-204ENST00000503477 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
AFF1-204ENST00000503477 EHMT2Q96KQ7 1210 aa27.11■■□□□ 1.93
AFF1-204ENST00000503477 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
AFF1-204ENST00000503477 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
AFF1-204ENST00000503477 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
AFF1-204ENST00000503477 ADAMTS12P58397 1594 aa27.07■■□□□ 1.92
AFF1-204ENST00000503477 SNAPC4Q5SXM2 1469 aa27.03■■□□□ 1.92
AFF1-204ENST00000503477 SYNJ2O15056 1496 aa26.95■■□□□ 1.91
AFF1-204ENST00000503477 GRIN2AQ12879 1464 aa26.88■■□□□ 1.89
AFF1-204ENST00000503477 CEP162Q5TB80 1403 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms