RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
AFF1-211ENST00000544085 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
AFF1-211ENST00000544085 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
AFF1-211ENST00000544085 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
AFF1-211ENST00000544085 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
AFF1-211ENST00000544085 ABCC9O60706 1549 aa15.08■□□□□ 0
AFF1-211ENST00000544085 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
AFF1-211ENST00000544085 NACADO15069 1562 aa14.94□□□□□ -0.02
AFF1-211ENST00000544085 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
AFF1-211ENST00000544085 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
AFF1-211ENST00000544085 SCRIBQ14160 1630 aa14.65□□□□□ -0.06
AFF1-211ENST00000544085 UNC13AQ9UPW8 1703 aa14.39□□□□□ -0.11
AFF1-211ENST00000544085 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
AFF1-211ENST00000544085 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
AFF1-211ENST00000544085 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
AFF1-211ENST00000544085 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
AFF1-211ENST00000544085 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
AFF1-211ENST00000544085 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
AFF1-211ENST00000544085 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
AFF1-211ENST00000544085 SMARCA4P51532 1647 aa14.08□□□□□ -0.16
AFF1-211ENST00000544085 WIZO95785 1651 aa13.98□□□□□ -0.17
AFF1-211ENST00000544085 PEG3Q9GZU2 1588 aa13.93□□□□□ -0.18
AFF1-211ENST00000544085 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
AFF1-211ENST00000544085 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
AFF1-211ENST00000544085 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
AFF1-211ENST00000544085 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
AFF1-211ENST00000544085 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
AFF1-211ENST00000544085 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
AFF1-211ENST00000544085 HMGXB3Q12766 1538 aa13.76□□□□□ -0.21
AFF1-211ENST00000544085 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
AFF1-211ENST00000544085 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
AFF1-211ENST00000544085 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
AFF1-211ENST00000544085 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
AFF1-211ENST00000544085 MYT1Q01538 1121 aa13.6□□□□□ -0.23
AFF1-211ENST00000544085 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
AFF1-211ENST00000544085 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
AFF1-211ENST00000544085 CFTRP13569 1480 aa13.44□□□□□ -0.26
AFF1-211ENST00000544085 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
AFF1-211ENST00000544085 PRKCSHP14314 528 aaPredicted RBP13.4□□□□□ -0.26
AFF1-211ENST00000544085 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
AFF1-211ENST00000544085 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
AFF1-211ENST00000544085 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
AFF1-211ENST00000544085 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
AFF1-211ENST00000544085 SYNJ1O43426 1573 aa13.27□□□□□ -0.28
AFF1-211ENST00000544085 TOP2BQ02880 1626 aa13.27□□□□□ -0.28
AFF1-211ENST00000544085 EEA1Q15075 1411 aa13.27□□□□□ -0.28
AFF1-211ENST00000544085 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
AFF1-211ENST00000544085 FANCD2Q9BXW9 1451 aa13.24□□□□□ -0.29
AFF1-211ENST00000544085 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
AFF1-211ENST00000544085 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
AFF1-211ENST00000544085 CUX1P39880 1505 aa13.2□□□□□ -0.3
AFF1-211ENST00000544085 NESP48681 1621 aa13.2□□□□□ -0.3
AFF1-211ENST00000544085 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
AFF1-211ENST00000544085 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
AFF1-211ENST00000544085 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
AFF1-211ENST00000544085 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
AFF1-211ENST00000544085 SOGA1O94964 1423 aa13.15□□□□□ -0.31
AFF1-211ENST00000544085 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
AFF1-211ENST00000544085 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
AFF1-211ENST00000544085 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
AFF1-211ENST00000544085 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
AFF1-211ENST00000544085 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
AFF1-211ENST00000544085 KIF21AQ7Z4S6 1674 aa13.07□□□□□ -0.32
AFF1-211ENST00000544085 RUSC2Q8N2Y8 1516 aa13.07□□□□□ -0.32
AFF1-211ENST00000544085 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
AFF1-211ENST00000544085 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
AFF1-211ENST00000544085 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
AFF1-211ENST00000544085 KIF21BO75037 1637 aa13.03□□□□□ -0.32
AFF1-211ENST00000544085 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
AFF1-211ENST00000544085 CUX2O14529 1486 aa13.01□□□□□ -0.33
AFF1-211ENST00000544085 ABCA10Q8WWZ4 1543 aa12.99□□□□□ -0.33
AFF1-211ENST00000544085 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
AFF1-211ENST00000544085 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
AFF1-211ENST00000544085 APLP2Q06481 763 aa12.98□□□□□ -0.33
AFF1-211ENST00000544085 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
AFF1-211ENST00000544085 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
AFF1-211ENST00000544085 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
AFF1-211ENST00000544085 WDR62O43379 1518 aa12.95□□□□□ -0.34
AFF1-211ENST00000544085 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
AFF1-211ENST00000544085 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
AFF1-211ENST00000544085 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
AFF1-211ENST00000544085 IGF1RP08069 1367 aa12.91□□□□□ -0.34
AFF1-211ENST00000544085 ERICH6Q7L0X2 663 aa12.89□□□□□ -0.35
AFF1-211ENST00000544085 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
AFF1-211ENST00000544085 RAPGEF2Q9Y4G8 1499 aa12.89□□□□□ -0.35
AFF1-211ENST00000544085 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
AFF1-211ENST00000544085 THOC2Q8NI27 1593 aaKnown RBP12.88□□□□□ -0.35
AFF1-211ENST00000544085 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
AFF1-211ENST00000544085 CARMIL1Q5VZK9 1371 aa12.88□□□□□ -0.35
AFF1-211ENST00000544085 CUL7Q14999 1698 aa12.87□□□□□ -0.35
AFF1-211ENST00000544085 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
AFF1-211ENST00000544085 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
AFF1-211ENST00000544085 TDRD9Q8NDG6 1382 aaKnown RBP12.83□□□□□ -0.36
AFF1-211ENST00000544085 CLIP1P30622 1438 aa12.81□□□□□ -0.36
AFF1-211ENST00000544085 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
AFF1-211ENST00000544085 PBRM1Q86U86 1689 aa12.77□□□□□ -0.37
AFF1-211ENST00000544085 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
AFF1-211ENST00000544085 AQRO60306 1485 aaKnown RBP eCLIP12.75□□□□□ -0.375e-7■■■■■ 37.3
AFF1-211ENST00000544085 EIF4G3O43432 1585 aaKnown RBP12.71□□□□□ -0.37
AFF1-211ENST00000544085 ADAMTS12P58397 1594 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms