RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
SP3-201ENST00000310015 PELP1Q8IZL8 1130 aaKnown RBP18.92■□□□□ 0.62
SP3-201ENST00000310015 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
SP3-201ENST00000310015 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
SP3-201ENST00000310015 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
SP3-201ENST00000310015 MYT1Q01538 1121 aa18.43■□□□□ 0.54
SP3-201ENST00000310015 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
SP3-201ENST00000310015 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
SP3-201ENST00000310015 CCER1Q8TC90 406 aaPredicted RBP18.06■□□□□ 0.48
SP3-201ENST00000310015 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
SP3-201ENST00000310015 CENPBP07199 599 aaPredicted RBP17.91■□□□□ 0.46
SP3-201ENST00000310015 NISCHQ9Y2I1 1504 aa17.9■□□□□ 0.46
SP3-201ENST00000310015 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.46
SP3-201ENST00000310015 APLP2Q06481 763 aa17.83■□□□□ 0.45
SP3-201ENST00000310015 FAM9AQ8IZU1 332 aaPredicted RBP17.72■□□□□ 0.43
SP3-201ENST00000310015 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
SP3-201ENST00000310015 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
SP3-201ENST00000310015 NEFLP07196 543 aa17.65■□□□□ 0.42
SP3-201ENST00000310015 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.38
SP3-201ENST00000310015 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
SP3-201ENST00000310015 HRCP23327 699 aa17.27■□□□□ 0.35
SP3-201ENST00000310015 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
SP3-201ENST00000310015 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
SP3-201ENST00000310015 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
SP3-201ENST00000310015 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
SP3-201ENST00000310015 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
SP3-201ENST00000310015 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
SP3-201ENST00000310015 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
SP3-201ENST00000310015 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
SP3-201ENST00000310015 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
SP3-201ENST00000310015 BCANQ96GW7 911 aa16.89■□□□□ 0.29
SP3-201ENST00000310015 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
SP3-201ENST00000310015 ITGAEP38570 1179 aa16.84■□□□□ 0.29
SP3-201ENST00000310015 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
SP3-201ENST00000310015 BCL11AQ9H165 835 aa16.73■□□□□ 0.27
SP3-201ENST00000310015 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
SP3-201ENST00000310015 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
SP3-201ENST00000310015 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
SP3-201ENST00000310015 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
SP3-201ENST00000310015 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
SP3-201ENST00000310015 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
SP3-201ENST00000310015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
SP3-201ENST00000310015 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
SP3-201ENST00000310015 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
SP3-201ENST00000310015 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
SP3-201ENST00000310015 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
SP3-201ENST00000310015 ARXQ96QS3 562 aa16.34■□□□□ 0.21
SP3-201ENST00000310015 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
SP3-201ENST00000310015 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
SP3-201ENST00000310015 CANXP27824 592 aaKnown RBP16.27■□□□□ 0.2
SP3-201ENST00000310015 NBR1Q14596 966 aa16.24■□□□□ 0.19
SP3-201ENST00000310015 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
SP3-201ENST00000310015 ANP32AP39687 249 aaKnown RBP16.22■□□□□ 0.19
SP3-201ENST00000310015 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
SP3-201ENST00000310015 ANP32BQ92688 251 aaKnown RBP16.13■□□□□ 0.17
SP3-201ENST00000310015 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
SP3-201ENST00000310015 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
SP3-201ENST00000310015 ANP32CO43423 234 aa16.09■□□□□ 0.17
SP3-201ENST00000310015 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
SP3-201ENST00000310015 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
SP3-201ENST00000310015 FKBP8Q14318 412 aa15.99■□□□□ 0.15
SP3-201ENST00000310015 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
SP3-201ENST00000310015 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
SP3-201ENST00000310015 SALL2Q9Y467 1007 aaPredicted RBP15.84■□□□□ 0.13
SP3-201ENST00000310015 TPRNQ4KMQ1 711 aa15.82■□□□□ 0.12
SP3-201ENST00000310015 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
SP3-201ENST00000310015 NEFMP07197 916 aa15.77■□□□□ 0.12
SP3-201ENST00000310015 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
SP3-201ENST00000310015 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
SP3-201ENST00000310015 TULP1O00294 542 aaPredicted RBP15.71■□□□□ 0.1
SP3-201ENST00000310015 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
SP3-201ENST00000310015 CDK11BP21127 795 aaKnown RBP15.7■□□□□ 0.1
SP3-201ENST00000310015 NAP1L5Q96NT1 182 aaPredicted RBP15.68■□□□□ 0.1
SP3-201ENST00000310015 TNNT2P45379 298 aaPredicted RBP15.66■□□□□ 0.1
SP3-201ENST00000310015 HNRNPUQ00839 825 aaKnown RBP eCLIP15.65■□□□□ 0.1
SP3-201ENST00000310015 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.09
SP3-201ENST00000310015 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
SP3-201ENST00000310015 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
SP3-201ENST00000310015 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
SP3-201ENST00000310015 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
SP3-201ENST00000310015 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
SP3-201ENST00000310015 DNTTIP2Q5QJE6 756 aaKnown RBP15.6■□□□□ 0.09
SP3-201ENST00000310015 ARID4BQ4LE39 1312 aaPredicted RBP15.58■□□□□ 0.09
SP3-201ENST00000310015 PTMAP06454 111 aaKnown RBP15.56■□□□□ 0.08
SP3-201ENST00000310015 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
SP3-201ENST00000310015 SENP3-EIF4A1A0A087X0R7 540 aa15.54■□□□□ 0.08
SP3-201ENST00000310015 MIER1Q8N108 512 aa15.54■□□□□ 0.08
SP3-201ENST00000310015 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
SP3-201ENST00000310015 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
SP3-201ENST00000310015 ARID3AQ99856 593 aa15.51■□□□□ 0.07
SP3-201ENST00000310015 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
SP3-201ENST00000310015 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
SP3-201ENST00000310015 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
SP3-201ENST00000310015 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
SP3-201ENST00000310015 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
SP3-201ENST00000310015 A0A0G2JS52 829 aa15.44■□□□□ 0.06
SP3-201ENST00000310015 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
SP3-201ENST00000310015 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
SP3-201ENST00000310015 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
SP3-201ENST00000310015 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms