RNA–Protein interactions for RNA: ENST00000439504.6

ATG16L2-203, Transcript of autophagy related 16 like 2, humanhuman

TSL 1 (best)

Gene ATG16L2, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG16L2-203ENST00000439504 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
ATG16L2-203ENST00000439504 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
ATG16L2-203ENST00000439504 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
ATG16L2-203ENST00000439504 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
ATG16L2-203ENST00000439504 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
ATG16L2-203ENST00000439504 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
ATG16L2-203ENST00000439504 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
ATG16L2-203ENST00000439504 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
ATG16L2-203ENST00000439504 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
ATG16L2-203ENST00000439504 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
ATG16L2-203ENST00000439504 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
ATG16L2-203ENST00000439504 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
ATG16L2-203ENST00000439504 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
ATG16L2-203ENST00000439504 ABCC9O60706 1549 aa22.16■■□□□ 1.14
ATG16L2-203ENST00000439504 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
ATG16L2-203ENST00000439504 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.17e-8■■■■■ 27.8
ATG16L2-203ENST00000439504 MYO15BQ96JP2 1530 aa21.86■■□□□ 1.09
ATG16L2-203ENST00000439504 HRCP23327 699 aa21.81■■□□□ 1.08
ATG16L2-203ENST00000439504 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
ATG16L2-203ENST00000439504 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
ATG16L2-203ENST00000439504 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
ATG16L2-203ENST00000439504 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
ATG16L2-203ENST00000439504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
ATG16L2-203ENST00000439504 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
ATG16L2-203ENST00000439504 APLP2Q06481 763 aa21.35■■□□□ 1.01
ATG16L2-203ENST00000439504 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1
ATG16L2-203ENST00000439504 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
ATG16L2-203ENST00000439504 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
ATG16L2-203ENST00000439504 ITGAEP38570 1179 aa21.2■□□□□ 0.98
ATG16L2-203ENST00000439504 YTHDC1Q96MU7 727 aaKnown RBP21.17■□□□□ 0.98
ATG16L2-203ENST00000439504 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
ATG16L2-203ENST00000439504 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
ATG16L2-203ENST00000439504 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
ATG16L2-203ENST00000439504 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
ATG16L2-203ENST00000439504 P3H3Q8IVL6 736 aa20.78■□□□□ 0.92
ATG16L2-203ENST00000439504 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
ATG16L2-203ENST00000439504 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
ATG16L2-203ENST00000439504 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
ATG16L2-203ENST00000439504 ARID3CA6NKF2 412 aa20.61■□□□□ 0.89
ATG16L2-203ENST00000439504 SOGA1O94964 1423 aa20.57■□□□□ 0.88
ATG16L2-203ENST00000439504 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
ATG16L2-203ENST00000439504 WIZO95785 1651 aa20.56■□□□□ 0.88
ATG16L2-203ENST00000439504 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
ATG16L2-203ENST00000439504 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
ATG16L2-203ENST00000439504 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
ATG16L2-203ENST00000439504 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
ATG16L2-203ENST00000439504 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
ATG16L2-203ENST00000439504 NACADO15069 1562 aa20.45■□□□□ 0.86
ATG16L2-203ENST00000439504 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
ATG16L2-203ENST00000439504 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
ATG16L2-203ENST00000439504 GTF3C3Q9Y5Q9 886 aa20.36■□□□□ 0.85
ATG16L2-203ENST00000439504 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
ATG16L2-203ENST00000439504 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
ATG16L2-203ENST00000439504 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
ATG16L2-203ENST00000439504 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
ATG16L2-203ENST00000439504 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
ATG16L2-203ENST00000439504 POLR3GLQ9BT43 218 aa20.22■□□□□ 0.83
ATG16L2-203ENST00000439504 CLIP1P30622 1438 aa20.19■□□□□ 0.82
ATG16L2-203ENST00000439504 FBLN2P98095 1184 aa20.18■□□□□ 0.82
ATG16L2-203ENST00000439504 MIER1Q8N108 512 aa20.16■□□□□ 0.82
ATG16L2-203ENST00000439504 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
ATG16L2-203ENST00000439504 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
ATG16L2-203ENST00000439504 KANK4Q5T7N3 995 aaPredicted RBP20.1■□□□□ 0.81
ATG16L2-203ENST00000439504 BCANQ96GW7 911 aa20.1■□□□□ 0.81
ATG16L2-203ENST00000439504 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
ATG16L2-203ENST00000439504 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
ATG16L2-203ENST00000439504 CHIC2Q9UKJ5 165 aa20.03■□□□□ 0.8
ATG16L2-203ENST00000439504 GOLGA3Q08378 1498 aa20■□□□□ 0.79
ATG16L2-203ENST00000439504 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
ATG16L2-203ENST00000439504 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
ATG16L2-203ENST00000439504 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
ATG16L2-203ENST00000439504 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
ATG16L2-203ENST00000439504 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
ATG16L2-203ENST00000439504 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
ATG16L2-203ENST00000439504 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
ATG16L2-203ENST00000439504 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
ATG16L2-203ENST00000439504 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
ATG16L2-203ENST00000439504 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
ATG16L2-203ENST00000439504 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
ATG16L2-203ENST00000439504 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
ATG16L2-203ENST00000439504 EEA1Q15075 1411 aa19.76■□□□□ 0.75
ATG16L2-203ENST00000439504 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
ATG16L2-203ENST00000439504 MYT1LQ9UL68 1186 aa19.75■□□□□ 0.75
ATG16L2-203ENST00000439504 CUX2O14529 1486 aa19.74■□□□□ 0.75
ATG16L2-203ENST00000439504 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
ATG16L2-203ENST00000439504 KIF27Q86VH2 1401 aa19.72■□□□□ 0.75
ATG16L2-203ENST00000439504 NEFLP07196 543 aa19.7■□□□□ 0.74
ATG16L2-203ENST00000439504 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
ATG16L2-203ENST00000439504 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
ATG16L2-203ENST00000439504 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
ATG16L2-203ENST00000439504 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.73
ATG16L2-203ENST00000439504 FOXD1Q16676 465 aa19.6■□□□□ 0.73
ATG16L2-203ENST00000439504 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
ATG16L2-203ENST00000439504 IRX6P78412 446 aaPredicted RBP19.59■□□□□ 0.73
ATG16L2-203ENST00000439504 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
ATG16L2-203ENST00000439504 ANP32CO43423 234 aa19.56■□□□□ 0.72
ATG16L2-203ENST00000439504 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
ATG16L2-203ENST00000439504 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.72
ATG16L2-203ENST00000439504 FKBP8Q14318 412 aa19.52■□□□□ 0.72
ATG16L2-203ENST00000439504 TONSLQ96HA7 1378 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms