RNA–Protein interactions for RNA: ENST00000542908.5

ATG16L2-219, Transcript of autophagy related 16 like 2, humanhuman

TSL 2

Gene ATG16L2, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG16L2-219ENST00000542908 NISCHQ9Y2I1 1504 aa57.04■■■■■ 6.72
ATG16L2-219ENST00000542908 CCDC180Q9P1Z9 1646 aa50.99■■■■■ 5.75
ATG16L2-219ENST00000542908 ABCC9O60706 1549 aa50.62■■■■■ 5.69
ATG16L2-219ENST00000542908 RB1CC1Q8TDY2 1594 aa48.3■■■■■ 5.32
ATG16L2-219ENST00000542908 NACADO15069 1562 aa48.09■■■■■ 5.29
ATG16L2-219ENST00000542908 DCAF8L2P0C7V8 631 aa47.75■■■■■ 5.23
ATG16L2-219ENST00000542908 MYO15BQ96JP2 1530 aa47.61■■■■■ 5.21
ATG16L2-219ENST00000542908 ZCCHC6Q5VYS8 1495 aaKnown RBP47.4■■■■■ 5.18
ATG16L2-219ENST00000542908 UNC13AQ9UPW8 1703 aa47.33■■■■■ 5.17
ATG16L2-219ENST00000542908 DNAJC5BQ9UF47 199 aa47.26■■■■■ 5.16
ATG16L2-219ENST00000542908 PABPN1Q86U42 306 aaKnown RBP eCLIP47.17■■■■■ 5.14
ATG16L2-219ENST00000542908 DCAF1Q9Y4B6 1507 aa47.15■■■■■ 5.14
ATG16L2-219ENST00000542908 BICRAQ9NZM4 1560 aa47.06■■■■■ 5.12
ATG16L2-219ENST00000542908 SCRIBQ14160 1630 aa46.5■■■■■ 5.03
ATG16L2-219ENST00000542908 SHROOM4Q9ULL8 1493 aa46.31■■■■■ 5
ATG16L2-219ENST00000542908 EIF4G1Q04637 1599 aaKnown RBP45.77■■■■■ 4.92
ATG16L2-219ENST00000542908 CC2D2AQ9P2K1 1620 aa45.77■■■■■ 4.92
ATG16L2-219ENST00000542908 CECR2Q9BXF3 1484 aa45.54■■■■■ 4.88
ATG16L2-219ENST00000542908 NCAPD3P42695 1498 aa44.44■■■■■ 4.7
ATG16L2-219ENST00000542908 SMARCA4P51532 1647 aa44.42■■■■■ 4.7
ATG16L2-219ENST00000542908 ATAD2BQ9ULI0 1458 aa44.36■■■■■ 4.69
ATG16L2-219ENST00000542908 BAZ1AQ9NRL2 1556 aaPredicted RBP44.19■■■■■ 4.66
ATG16L2-219ENST00000542908 SMARCA2P51531 1590 aa44.18■■■■■ 4.66
ATG16L2-219ENST00000542908 HMGXB3Q12766 1538 aa44.14■■■■■ 4.66
ATG16L2-219ENST00000542908 PEG3Q9GZU2 1588 aa44.02■■■■■ 4.64
ATG16L2-219ENST00000542908 MROH2BQ7Z745 1585 aa44.01■■■■■ 4.64
ATG16L2-219ENST00000542908 BAZ1BQ9UIG0 1483 aaKnown RBP43.88■■■■■ 4.61
ATG16L2-219ENST00000542908 NESP48681 1621 aa43.66■■■■■ 4.58
ATG16L2-219ENST00000542908 ERCC6Q03468 1493 aa43.56■■■■■ 4.56
ATG16L2-219ENST00000542908 WIZO95785 1651 aa43.46■■■■■ 4.55
ATG16L2-219ENST00000542908 CUX2O14529 1486 aa43.44■■■■■ 4.54
ATG16L2-219ENST00000542908 LAMC3Q9Y6N6 1575 aa43.32■■■■■ 4.52
ATG16L2-219ENST00000542908 RSF1Q96T23 1441 aaPredicted RBP43.21■■■■■ 4.51
ATG16L2-219ENST00000542908 THOC2Q8NI27 1593 aaKnown RBP43.15■■■■■ 4.5
ATG16L2-219ENST00000542908 KIF21AQ7Z4S6 1674 aa43.07■■■■■ 4.49
ATG16L2-219ENST00000542908 CADPSQ9ULU8 1353 aa43.06■■■■■ 4.48
ATG16L2-219ENST00000542908 PDS5BQ9NTI5 1447 aa42.99■■■■■ 4.47
ATG16L2-219ENST00000542908 DNAJC5Q9H3Z4 198 aa42.98■■■■■ 4.47
ATG16L2-219ENST00000542908 TOP2AP11388 1531 aaKnown RBP42.92■■■■■ 4.46
ATG16L2-219ENST00000542908 CFTRP13569 1480 aa42.7■■■■■ 4.43
ATG16L2-219ENST00000542908 MRC2Q9UBG0 1479 aa42.68■■■■■ 4.42
ATG16L2-219ENST00000542908 WDR62O43379 1518 aa42.61■■■■■ 4.41
ATG16L2-219ENST00000542908 FANCD2Q9BXW9 1451 aa42.58■■■■■ 4.41
ATG16L2-219ENST00000542908 CEP164Q9UPV0 1460 aa42.55■■■■■ 4.4
ATG16L2-219ENST00000542908 CCDC88BA6NC98 1476 aa42.44■■■■■ 4.38
ATG16L2-219ENST00000542908 URB2Q14146 1524 aaKnown RBP42.29■■■■■ 4.36
ATG16L2-219ENST00000542908 PRDM2Q13029 1718 aa42.26■■■■■ 4.36
ATG16L2-219ENST00000542908 TOPBP1Q92547 1522 aa41.85■■■■■ 4.29
ATG16L2-219ENST00000542908 DNMBPQ6XZF7 1577 aa41.71■■■■■ 4.27
ATG16L2-219ENST00000542908 IFT140Q96RY7 1462 aa41.7■■■■■ 4.27
ATG16L2-219ENST00000542908 ZNF608Q9ULD9 1512 aaPredicted RBP41.69■■■■■ 4.27
ATG16L2-219ENST00000542908 ABCC8Q09428 1581 aa41.66■■■■■ 4.26
ATG16L2-219ENST00000542908 TARBP1Q13395 1621 aaKnown RBP41.5■■■■■ 4.23
ATG16L2-219ENST00000542908 POLA1P09884 1462 aaPredicted RBP41.46■■■■■ 4.23
ATG16L2-219ENST00000542908 EIF4G3O43432 1585 aaKnown RBP41.45■■■■■ 4.23
ATG16L2-219ENST00000542908 OSCARQ8IYS5 282 aa41.42■■■■■ 4.22
ATG16L2-219ENST00000542908 SUPT5HO00267 1087 aaKnown RBP41.41■■■■■ 4.22
ATG16L2-219ENST00000542908 AQRO60306 1485 aaKnown RBP eCLIP41.32■■■■■ 4.23e-6■□□□□ 11.3
ATG16L2-219ENST00000542908 CUX1P39880 1505 aa41.31■■■■■ 4.2
ATG16L2-219ENST00000542908 RAD54L2Q9Y4B4 1467 aa41.3■■■■■ 4.2
ATG16L2-219ENST00000542908 FGD5Q6ZNL6 1462 aa41.23■■■■■ 4.19
ATG16L2-219ENST00000542908 SOGA1O94964 1423 aa41.19■■■■■ 4.18
ATG16L2-219ENST00000542908 TRIM41Q8WV44 630 aa41.15■■■■■ 4.18
ATG16L2-219ENST00000542908 TDRD9Q8NDG6 1382 aaKnown RBP41.1■■■■■ 4.17
ATG16L2-219ENST00000542908 CHD1O14646 1710 aa41.05■■■■■ 4.16
ATG16L2-219ENST00000542908 WDR97A6NE52 1622 aa41■■■■■ 4.15
ATG16L2-219ENST00000542908 RIMBP3CA6NJZ7 1639 aa40.98■■■■■ 4.15
ATG16L2-219ENST00000542908 RIMBP3BA6NNM3 1639 aa40.98■■■■■ 4.15
ATG16L2-219ENST00000542908 RIMBP3Q9UFD9 1639 aa40.98■■■■■ 4.15
ATG16L2-219ENST00000542908 SNAPC4Q5SXM2 1469 aa40.9■■■■■ 4.14
ATG16L2-219ENST00000542908 ARHGEF11O15085 1522 aa40.89■■■■■ 4.14
ATG16L2-219ENST00000542908 GRIN2BQ13224 1484 aa40.81■■■■■ 4.12
ATG16L2-219ENST00000542908 ABCA10Q8WWZ4 1543 aa40.79■■■■■ 4.12
ATG16L2-219ENST00000542908 FBLN2P98095 1184 aa40.79■■■■■ 4.12
ATG16L2-219ENST00000542908 MAGI1Q96QZ7 1491 aaPredicted RBP40.77■■■■■ 4.12
ATG16L2-219ENST00000542908 ABCA5Q8WWZ7 1642 aa40.75■■■■■ 4.11
ATG16L2-219ENST00000542908 SYNJ1O43426 1573 aa40.73■■■■■ 4.11
ATG16L2-219ENST00000542908 BIVM-ERCC5R4GMW8 1640 aa40.72■■■■■ 4.11
ATG16L2-219ENST00000542908 TOP2BQ02880 1626 aa40.71■■■■■ 4.11
ATG16L2-219ENST00000542908 GAPVD1Q14C86 1478 aa40.71■■■■■ 4.11
ATG16L2-219ENST00000542908 PBRM1Q86U86 1689 aa40.71■■■■■ 4.11
ATG16L2-219ENST00000542908 WRNQ14191 1432 aaPredicted RBP eCLIP40.67■■■■■ 4.1
ATG16L2-219ENST00000542908 CLASP1Q7Z460 1538 aa40.66■■■■■ 4.1
ATG16L2-219ENST00000542908 SYNJ2O15056 1496 aa40.64■■■■■ 4.1
ATG16L2-219ENST00000542908 CHMP7Q8WUX9 453 aaPredicted RBP40.57■■■■■ 4.09
ATG16L2-219ENST00000542908 ARAP1Q96P48 1450 aa40.56■■■■■ 4.08
ATG16L2-219ENST00000542908 CYB5RLQ6IPT4 315 aa40.45■■■■■ 4.07
ATG16L2-219ENST00000542908 ADAMTS12P58397 1594 aa40.39■■■■■ 4.06
ATG16L2-219ENST00000542908 GRIN2AQ12879 1464 aa40.32■■■■■ 4.04
ATG16L2-219ENST00000542908 ERICH3Q5RHP9 1530 aa40.26■■■■■ 4.03
ATG16L2-219ENST00000542908 CEP170Q5SW79 1584 aa40.22■■■■■ 4.03
ATG16L2-219ENST00000542908 FHAD1B1AJZ9 1412 aa40.21■■■■■ 4.03
ATG16L2-219ENST00000542908 NUP160Q12769 1436 aa40.21■■■■■ 4.03
ATG16L2-219ENST00000542908 ERCC6L2Q5T890 1561 aa40.09■■■■■ 4.01
ATG16L2-219ENST00000542908 SHROOM2Q13796 1616 aa40.01■■■■■ 4
ATG16L2-219ENST00000542908 IGF1RP08069 1367 aa39.86■■■■□ 3.97
ATG16L2-219ENST00000542908 KIF27Q86VH2 1401 aa39.82■■■■□ 3.97
ATG16L2-219ENST00000542908 RUSC2Q8N2Y8 1516 aa39.81■■■■□ 3.96
ATG16L2-219ENST00000542908 TRHP20396 242 aaPredicted RBP39.78■■■■□ 3.96
ATG16L2-219ENST00000542908 CUL7Q14999 1698 aa39.72■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms