RNA–Protein interactions for RNA: ENST00000239940.11

PFN2-201, Transcript of profilin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PFN2, Length 2,261 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN2-201ENST00000239940 NISCHQ9Y2I1 1504 aa39.02■■■■□ 3.84
PFN2-201ENST00000239940 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
PFN2-201ENST00000239940 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
PFN2-201ENST00000239940 DCAF8L2P0C7V8 631 aa32.69■■■□□ 2.82
PFN2-201ENST00000239940 ABCC9O60706 1549 aa32.42■■■□□ 2.78
PFN2-201ENST00000239940 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
PFN2-201ENST00000239940 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
PFN2-201ENST00000239940 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
PFN2-201ENST00000239940 NACADO15069 1562 aa31.53■■■□□ 2.64
PFN2-201ENST00000239940 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
PFN2-201ENST00000239940 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
PFN2-201ENST00000239940 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
PFN2-201ENST00000239940 UNC13AQ9UPW8 1703 aa30.77■■■□□ 2.52
PFN2-201ENST00000239940 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.51
PFN2-201ENST00000239940 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
PFN2-201ENST00000239940 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
PFN2-201ENST00000239940 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
PFN2-201ENST00000239940 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
PFN2-201ENST00000239940 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
PFN2-201ENST00000239940 WIZO95785 1651 aa30.02■■■□□ 2.4
PFN2-201ENST00000239940 SMARCA4P51532 1647 aa29.97■■■□□ 2.39
PFN2-201ENST00000239940 EIF4G1Q04637 1599 aaKnown RBP29.57■■■□□ 2.32
PFN2-201ENST00000239940 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
PFN2-201ENST00000239940 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
PFN2-201ENST00000239940 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
PFN2-201ENST00000239940 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
PFN2-201ENST00000239940 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
PFN2-201ENST00000239940 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
PFN2-201ENST00000239940 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
PFN2-201ENST00000239940 NCAPD3P42695 1498 aa29.21■■■□□ 2.27
PFN2-201ENST00000239940 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
PFN2-201ENST00000239940 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
PFN2-201ENST00000239940 TRIM41Q8WV44 630 aa29■■■□□ 2.23
PFN2-201ENST00000239940 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
PFN2-201ENST00000239940 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
PFN2-201ENST00000239940 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
PFN2-201ENST00000239940 LOC105371045A0A1W2PR82 267 aa28.65■■■□□ 2.18
PFN2-201ENST00000239940 CFTRP13569 1480 aa28.6■■■□□ 2.17
PFN2-201ENST00000239940 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
PFN2-201ENST00000239940 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
PFN2-201ENST00000239940 EHMT2Q96KQ7 1210 aa28.52■■■□□ 2.16
PFN2-201ENST00000239940 NESP48681 1621 aa28.5■■■□□ 2.15
PFN2-201ENST00000239940 SYNJ1O43426 1573 aa28.47■■■□□ 2.15
PFN2-201ENST00000239940 SOGA1O94964 1423 aa28.37■■■□□ 2.13
PFN2-201ENST00000239940 RUSC2Q8N2Y8 1516 aa28.32■■■□□ 2.12
PFN2-201ENST00000239940 CUX1P39880 1505 aa28.28■■■□□ 2.12
PFN2-201ENST00000239940 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
PFN2-201ENST00000239940 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
PFN2-201ENST00000239940 PRDM2Q13029 1718 aa28.2■■■□□ 2.11
PFN2-201ENST00000239940 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
PFN2-201ENST00000239940 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
PFN2-201ENST00000239940 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
PFN2-201ENST00000239940 CEP164Q9UPV0 1460 aa28.01■■■□□ 2.07
PFN2-201ENST00000239940 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
PFN2-201ENST00000239940 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
PFN2-201ENST00000239940 KIF21AQ7Z4S6 1674 aa27.95■■■□□ 2.07
PFN2-201ENST00000239940 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
PFN2-201ENST00000239940 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
PFN2-201ENST00000239940 EEA1Q15075 1411 aa27.91■■■□□ 2.06
PFN2-201ENST00000239940 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
PFN2-201ENST00000239940 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
PFN2-201ENST00000239940 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
PFN2-201ENST00000239940 CUX2O14529 1486 aa27.81■■■□□ 2.04
PFN2-201ENST00000239940 UBTFP17480 764 aaKnown RBP27.8■■■□□ 2.04
PFN2-201ENST00000239940 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
PFN2-201ENST00000239940 RAPGEF2Q9Y4G8 1499 aa27.72■■■□□ 2.03
PFN2-201ENST00000239940 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
PFN2-201ENST00000239940 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
PFN2-201ENST00000239940 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
PFN2-201ENST00000239940 IGF1RP08069 1367 aa27.65■■■□□ 2.02
PFN2-201ENST00000239940 RANGAP1P46060 587 aaPredicted RBP27.64■■■□□ 2.01
PFN2-201ENST00000239940 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
PFN2-201ENST00000239940 TNIKQ9UKE5 1360 aa27.62■■■□□ 2.01
PFN2-201ENST00000239940 KIF21BO75037 1637 aa27.61■■■□□ 2.01
PFN2-201ENST00000239940 PRXQ9BXM0 1461 aa27.6■■■□□ 2.01
PFN2-201ENST00000239940 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
PFN2-201ENST00000239940 CEP162Q5TB80 1403 aa27.57■■■□□ 2
PFN2-201ENST00000239940 PCGF6Q9BYE7 350 aa27.56■■■□□ 2
PFN2-201ENST00000239940 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
PFN2-201ENST00000239940 WDR62O43379 1518 aa27.47■■□□□ 1.99
PFN2-201ENST00000239940 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
PFN2-201ENST00000239940 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
PFN2-201ENST00000239940 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
PFN2-201ENST00000239940 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.985e-12■■■■■ 47.9
PFN2-201ENST00000239940 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
PFN2-201ENST00000239940 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
PFN2-201ENST00000239940 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
PFN2-201ENST00000239940 ZNF608Q9ULD9 1512 aaPredicted RBP27.4■■□□□ 1.98
PFN2-201ENST00000239940 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
PFN2-201ENST00000239940 CLIP1P30622 1438 aa27.34■■□□□ 1.97
PFN2-201ENST00000239940 HRCP23327 699 aa27.29■■□□□ 1.96
PFN2-201ENST00000239940 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
PFN2-201ENST00000239940 TTBK1Q5TCY1 1321 aaPredicted RBP27.23■■□□□ 1.95
PFN2-201ENST00000239940 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
PFN2-201ENST00000239940 CUL7Q14999 1698 aa27.16■■□□□ 1.94
PFN2-201ENST00000239940 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
PFN2-201ENST00000239940 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
PFN2-201ENST00000239940 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
PFN2-201ENST00000239940 P3H3Q8IVL6 736 aa27.11■■□□□ 1.93
PFN2-201ENST00000239940 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms