RNA–Protein interactions for RNA: ENST00000599302.1

SELENOW-208, Transcript of selenoprotein W, humanhuman

TSL 3

Gene SELENOW, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOW-208ENST00000599302 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
SELENOW-208ENST00000599302 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
SELENOW-208ENST00000599302 ABCC9O60706 1549 aa29.45■■■□□ 2.31
SELENOW-208ENST00000599302 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
SELENOW-208ENST00000599302 NACADO15069 1562 aa27.94■■■□□ 2.06
SELENOW-208ENST00000599302 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
SELENOW-208ENST00000599302 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
SELENOW-208ENST00000599302 DNAJC5BQ9UF47 199 aa27.61■■■□□ 2.01
SELENOW-208ENST00000599302 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
SELENOW-208ENST00000599302 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
SELENOW-208ENST00000599302 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
SELENOW-208ENST00000599302 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
SELENOW-208ENST00000599302 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
SELENOW-208ENST00000599302 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
SELENOW-208ENST00000599302 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
SELENOW-208ENST00000599302 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
SELENOW-208ENST00000599302 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
SELENOW-208ENST00000599302 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
SELENOW-208ENST00000599302 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
SELENOW-208ENST00000599302 NCAPD3P42695 1498 aa25.82■■□□□ 1.72
SELENOW-208ENST00000599302 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
SELENOW-208ENST00000599302 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
SELENOW-208ENST00000599302 SMARCA4P51532 1647 aa25.64■■□□□ 1.7
SELENOW-208ENST00000599302 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
SELENOW-208ENST00000599302 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
SELENOW-208ENST00000599302 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
SELENOW-208ENST00000599302 CUX2O14529 1486 aa25.46■■□□□ 1.67
SELENOW-208ENST00000599302 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
SELENOW-208ENST00000599302 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SELENOW-208ENST00000599302 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
SELENOW-208ENST00000599302 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
SELENOW-208ENST00000599302 NESP48681 1621 aa25.29■■□□□ 1.64
SELENOW-208ENST00000599302 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
SELENOW-208ENST00000599302 PDS5BQ9NTI5 1447 aa25.11■■□□□ 1.61
SELENOW-208ENST00000599302 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SELENOW-208ENST00000599302 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
SELENOW-208ENST00000599302 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
SELENOW-208ENST00000599302 WIZO95785 1651 aa25■■□□□ 1.59
SELENOW-208ENST00000599302 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
SELENOW-208ENST00000599302 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
SELENOW-208ENST00000599302 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.56
SELENOW-208ENST00000599302 WDR62O43379 1518 aa24.75■■□□□ 1.55
SELENOW-208ENST00000599302 CFTRP13569 1480 aa24.74■■□□□ 1.55
SELENOW-208ENST00000599302 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
SELENOW-208ENST00000599302 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
SELENOW-208ENST00000599302 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
SELENOW-208ENST00000599302 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
SELENOW-208ENST00000599302 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
SELENOW-208ENST00000599302 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
SELENOW-208ENST00000599302 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
SELENOW-208ENST00000599302 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
SELENOW-208ENST00000599302 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
SELENOW-208ENST00000599302 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
SELENOW-208ENST00000599302 TOPBP1Q92547 1522 aa24.23■■□□□ 1.47
SELENOW-208ENST00000599302 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
SELENOW-208ENST00000599302 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
SELENOW-208ENST00000599302 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
SELENOW-208ENST00000599302 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
SELENOW-208ENST00000599302 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
SELENOW-208ENST00000599302 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.439e-30■■■■■ 277.8
SELENOW-208ENST00000599302 SOGA1O94964 1423 aa23.93■■□□□ 1.42
SELENOW-208ENST00000599302 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
SELENOW-208ENST00000599302 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
SELENOW-208ENST00000599302 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
SELENOW-208ENST00000599302 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
SELENOW-208ENST00000599302 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
SELENOW-208ENST00000599302 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
SELENOW-208ENST00000599302 FBLN2P98095 1184 aa23.84■■□□□ 1.41
SELENOW-208ENST00000599302 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
SELENOW-208ENST00000599302 WDR97A6NE52 1622 aa23.83■■□□□ 1.41
SELENOW-208ENST00000599302 CUX1P39880 1505 aa23.79■■□□□ 1.4
SELENOW-208ENST00000599302 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
SELENOW-208ENST00000599302 CHD1O14646 1710 aa23.79■■□□□ 1.4
SELENOW-208ENST00000599302 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
SELENOW-208ENST00000599302 GRIN2BQ13224 1484 aa23.71■■□□□ 1.39
SELENOW-208ENST00000599302 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
SELENOW-208ENST00000599302 MAGI1Q96QZ7 1491 aaPredicted RBP23.71■■□□□ 1.39
SELENOW-208ENST00000599302 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
SELENOW-208ENST00000599302 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
SELENOW-208ENST00000599302 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
SELENOW-208ENST00000599302 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
SELENOW-208ENST00000599302 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
SELENOW-208ENST00000599302 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
SELENOW-208ENST00000599302 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
SELENOW-208ENST00000599302 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
SELENOW-208ENST00000599302 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
SELENOW-208ENST00000599302 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
SELENOW-208ENST00000599302 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
SELENOW-208ENST00000599302 TRHP20396 242 aaPredicted RBP23.45■■□□□ 1.34
SELENOW-208ENST00000599302 BIVM-ERCC5R4GMW8 1640 aa23.42■■□□□ 1.34
SELENOW-208ENST00000599302 GRIN2AQ12879 1464 aa23.37■■□□□ 1.33
SELENOW-208ENST00000599302 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
SELENOW-208ENST00000599302 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
SELENOW-208ENST00000599302 NUP160Q12769 1436 aa23.32■■□□□ 1.32
SELENOW-208ENST00000599302 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
SELENOW-208ENST00000599302 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
SELENOW-208ENST00000599302 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
SELENOW-208ENST00000599302 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
SELENOW-208ENST00000599302 JPH4Q96JJ6 628 aa23.12■■□□□ 1.29
SELENOW-208ENST00000599302 PRG4Q92954 1404 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms