Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
TTC9CQ8N5M4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 AL592293.1-201ENST00000502889 1188 ntBASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 AC022211.4-201ENST00000625094 2161 ntBASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC9CQ8N5M4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC9CQ8N5M4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC9CQ8N5M4 SLC6A10P-202ENST00000431994 2058 ntBASIC18.67■□□□□ 0.58
TTC9CQ8N5M4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9CQ8N5M4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TTC9CQ8N5M4 AC018755.3-202ENST00000596210 929 ntBASIC18.67■□□□□ 0.58
TTC9CQ8N5M4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 U85056.1-201ENST00000616429 682 ntBASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TTC9CQ8N5M4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9CQ8N5M4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.64■□□□□ 0.58
TTC9CQ8N5M4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 ABHD17AP5-201ENST00000580133 923 ntBASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC9CQ8N5M4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TTC9CQ8N5M4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 SPCS2P3-201ENST00000500401 656 ntBASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.62■□□□□ 0.57
TTC9CQ8N5M4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 AC138932.3-201ENST00000567634 1902 ntBASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms