Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.52■■■□□ 2.48
RC3H1Q5TC82 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.52■■■□□ 2.48
RC3H1Q5TC82 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RC3H1Q5TC82 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RC3H1Q5TC82 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RC3H1Q5TC82 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.51■■■□□ 2.48
RC3H1Q5TC82 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
RC3H1Q5TC82 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.51■■■□□ 2.48
RC3H1Q5TC82 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.51■■■□□ 2.47
RC3H1Q5TC82 AC133561.4-201ENST00000566112 224 ntBASIC30.51■■■□□ 2.47
RC3H1Q5TC82 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.51■■■□□ 2.47
RC3H1Q5TC82 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
RC3H1Q5TC82 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RC3H1Q5TC82 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
RC3H1Q5TC82 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
RC3H1Q5TC82 AC096631.2-201ENST00000436136 790 ntBASIC30.49■■■□□ 2.47
RC3H1Q5TC82 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 AL512631.2-201ENST00000604634 923 ntBASIC30.49■■■□□ 2.47
RC3H1Q5TC82 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RC3H1Q5TC82 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.48■■■□□ 2.47
RC3H1Q5TC82 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RC3H1Q5TC82 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RC3H1Q5TC82 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.47■■■□□ 2.47
RC3H1Q5TC82 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
RC3H1Q5TC82 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
RC3H1Q5TC82 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RC3H1Q5TC82 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.47■■■□□ 2.47
RC3H1Q5TC82 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.46■■■□□ 2.47
RC3H1Q5TC82 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.46■■■□□ 2.47
RC3H1Q5TC82 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RC3H1Q5TC82 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
RC3H1Q5TC82 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RC3H1Q5TC82 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
RC3H1Q5TC82 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RC3H1Q5TC82 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.44■■■□□ 2.46
RC3H1Q5TC82 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
RC3H1Q5TC82 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
RC3H1Q5TC82 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RC3H1Q5TC82 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
RC3H1Q5TC82 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RC3H1Q5TC82 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RC3H1Q5TC82 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RC3H1Q5TC82 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.41■■■□□ 2.46
RC3H1Q5TC82 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.41■■■□□ 2.46
RC3H1Q5TC82 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.4■■■□□ 2.46
RC3H1Q5TC82 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.39■■■□□ 2.46
RC3H1Q5TC82 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RC3H1Q5TC82 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RC3H1Q5TC82 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.39■■■□□ 2.46
RC3H1Q5TC82 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
RC3H1Q5TC82 AF131216.4-201ENST00000638924 1588 ntBASIC30.38■■■□□ 2.45
RC3H1Q5TC82 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RC3H1Q5TC82 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.38■■■□□ 2.45
RC3H1Q5TC82 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
RC3H1Q5TC82 AP004609.3-201ENST00000610705 1884 ntBASIC30.38■■■□□ 2.45
RC3H1Q5TC82 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RC3H1Q5TC82 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RC3H1Q5TC82 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.37■■■□□ 2.45
RC3H1Q5TC82 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.37■■■□□ 2.45
RC3H1Q5TC82 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.37■■■□□ 2.45
RC3H1Q5TC82 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.37■■■□□ 2.45
RC3H1Q5TC82 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.36■■■□□ 2.45
RC3H1Q5TC82 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RC3H1Q5TC82 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
RC3H1Q5TC82 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
RC3H1Q5TC82 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
RC3H1Q5TC82 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
RC3H1Q5TC82 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
RC3H1Q5TC82 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.34■■■□□ 2.45
RC3H1Q5TC82 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RC3H1Q5TC82 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RC3H1Q5TC82 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RC3H1Q5TC82 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RC3H1Q5TC82 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.33■■■□□ 2.45
RC3H1Q5TC82 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.33■■■□□ 2.45
RC3H1Q5TC82 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.33■■■□□ 2.45
RC3H1Q5TC82 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
RC3H1Q5TC82 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.32■■■□□ 2.44
RC3H1Q5TC82 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.32■■■□□ 2.44
RC3H1Q5TC82 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
RC3H1Q5TC82 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
RC3H1Q5TC82 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RC3H1Q5TC82 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.32■■■□□ 2.44
RC3H1Q5TC82 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
RC3H1Q5TC82 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RC3H1Q5TC82 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms