Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.31■□□□□ 0.52
TM4SF20Q53R12 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TM4SF20Q53R12 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF20Q53R12 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF20Q53R12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TM4SF20Q53R12 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF20Q53R12 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 SPCS2P3-201ENST00000500401 656 ntBASIC18.29■□□□□ 0.52
TM4SF20Q53R12 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF20Q53R12 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 AC018755.3-202ENST00000596210 929 ntBASIC18.28■□□□□ 0.52
TM4SF20Q53R12 AC129492.7-201ENST00000622992 756 ntBASIC18.28■□□□□ 0.52
TM4SF20Q53R12 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF20Q53R12 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF20Q53R12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF20Q53R12 DUX4L9-201ENST00000449051 1259 ntBASIC18.27■□□□□ 0.52
TM4SF20Q53R12 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TM4SF20Q53R12 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TM4SF20Q53R12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF20Q53R12 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF20Q53R12 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF20Q53R12 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF20Q53R12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF20Q53R12 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF20Q53R12 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TM4SF20Q53R12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF20Q53R12 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.25■□□□□ 0.51
TM4SF20Q53R12 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TM4SF20Q53R12 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 AC097639.1-201ENST00000565519 1891 ntBASIC18.23■□□□□ 0.51
TM4SF20Q53R12 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 DUX4L18-201ENST00000553347 1267 ntBASIC18.23■□□□□ 0.51
TM4SF20Q53R12 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 MIR6765-201ENST00000614092 87 ntBASIC18.23■□□□□ 0.51
TM4SF20Q53R12 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TM4SF20Q53R12 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms