Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO1Q2MKA7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RSPO1Q2MKA7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 SPCS2P3-201ENST00000500401 656 ntBASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 U85056.1-201ENST00000616429 682 ntBASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
RSPO1Q2MKA7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO1Q2MKA7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RSPO1Q2MKA7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.65■□□□□ 0.9
RSPO1Q2MKA7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO1Q2MKA7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RSPO1Q2MKA7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RSPO1Q2MKA7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RSPO1Q2MKA7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RSPO1Q2MKA7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO1Q2MKA7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO1Q2MKA7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO1Q2MKA7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.63■□□□□ 0.89
RSPO1Q2MKA7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO1Q2MKA7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO1Q2MKA7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO1Q2MKA7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO1Q2MKA7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.62■□□□□ 0.89
RSPO1Q2MKA7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.62■□□□□ 0.89
RSPO1Q2MKA7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO1Q2MKA7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RSPO1Q2MKA7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RSPO1Q2MKA7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 KRT18P10-201ENST00000388836 1287 ntBASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RSPO1Q2MKA7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 AL139125.2-201ENST00000623134 1869 ntBASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RSPO1Q2MKA7 KRT18P60-201ENST00000312876 1297 ntBASIC20.58■□□□□ 0.89
RSPO1Q2MKA7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RSPO1Q2MKA7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
RSPO1Q2MKA7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 DUX4L9-201ENST00000449051 1259 ntBASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RSPO1Q2MKA7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO1Q2MKA7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.56■□□□□ 0.88
RSPO1Q2MKA7 AP003733.4-201ENST00000623785 1697 ntBASIC20.56■□□□□ 0.88
RSPO1Q2MKA7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO1Q2MKA7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RSPO1Q2MKA7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 AC093323.1-202ENST00000635031 2045 ntBASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 AC018755.3-202ENST00000596210 929 ntBASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 AC129492.7-201ENST00000622992 756 ntBASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RSPO1Q2MKA7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RSPO1Q2MKA7 RPS2P7-201ENST00000447334 885 ntBASIC20.54■□□□□ 0.88
RSPO1Q2MKA7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RSPO1Q2MKA7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.54■□□□□ 0.88
RSPO1Q2MKA7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms