Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL1P22362 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCL1P22362 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL1P22362 AC093536.1-201ENST00000569153 554 ntBASIC20.51■□□□□ 0.87
CCL1P22362 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL1P22362 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.51■□□□□ 0.87
CCL1P22362 AC007029.1-201ENST00000604183 313 ntBASIC20.51■□□□□ 0.87
CCL1P22362 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL1P22362 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL1P22362 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL1P22362 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL1P22362 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCL1P22362 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.5■□□□□ 0.87
CCL1P22362 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.5■□□□□ 0.87
CCL1P22362 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.5■□□□□ 0.87
CCL1P22362 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL1P22362 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCL1P22362 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL1P22362 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCL1P22362 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL1P22362 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CCL1P22362 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL1P22362 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.49■□□□□ 0.87
CCL1P22362 MIR6089-201ENST00000616698 64 ntBASIC20.49■□□□□ 0.87
CCL1P22362 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.49■□□□□ 0.87
CCL1P22362 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL1P22362 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCL1P22362 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCL1P22362 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.49■□□□□ 0.87
CCL1P22362 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL1P22362 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL1P22362 LINC01124-201ENST00000409786 2117 ntBASIC20.48■□□□□ 0.87
CCL1P22362 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL1P22362 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL1P22362 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL1P22362 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.48■□□□□ 0.87
CCL1P22362 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL1P22362 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.48■□□□□ 0.87
CCL1P22362 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.48■□□□□ 0.87
CCL1P22362 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCL1P22362 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL1P22362 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.48■□□□□ 0.87
CCL1P22362 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL1P22362 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL1P22362 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL1P22362 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL1P22362 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.47■□□□□ 0.87
CCL1P22362 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL1P22362 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.47■□□□□ 0.87
CCL1P22362 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CCL1P22362 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL1P22362 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CCL1P22362 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CCL1P22362 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL1P22362 MIR4449-201ENST00000578365 66 ntBASIC20.46■□□□□ 0.87
CCL1P22362 RAP2CP1-202ENST00000605179 643 ntBASIC20.46■□□□□ 0.87
CCL1P22362 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL1P22362 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.46■□□□□ 0.87
CCL1P22362 LINC00543-201ENST00000567234 1845 ntBASIC20.46■□□□□ 0.87
CCL1P22362 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.45■□□□□ 0.87
CCL1P22362 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.45■□□□□ 0.87
CCL1P22362 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL1P22362 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL1P22362 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.45■□□□□ 0.86
CCL1P22362 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
CCL1P22362 AC141586.4-201ENST00000624558 1573 ntBASIC20.45■□□□□ 0.86
CCL1P22362 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL1P22362 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL1P22362 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.44■□□□□ 0.86
CCL1P22362 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL1P22362 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCL1P22362 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL1P22362 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCL1P22362 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.44■□□□□ 0.86
CCL1P22362 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCL1P22362 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCL1P22362 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CCL1P22362 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCL1P22362 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCL1P22362 KRT18P10-201ENST00000388836 1287 ntBASIC20.42■□□□□ 0.86
CCL1P22362 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCL1P22362 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCL1P22362 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL1P22362 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL1P22362 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL1P22362 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL1P22362 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.41■□□□□ 0.86
CCL1P22362 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.41■□□□□ 0.86
CCL1P22362 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.41■□□□□ 0.86
CCL1P22362 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCL1P22362 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.41■□□□□ 0.86
CCL1P22362 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.41■□□□□ 0.86
CCL1P22362 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL1P22362 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCL1P22362 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL1P22362 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL1P22362 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL1P22362 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL1P22362 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CCL1P22362 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms