Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF4P18848 AL139125.2-201ENST00000623134 1869 ntBASIC19.58■□□□□ 0.73
ATF4P18848 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF4P18848 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF4P18848 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF4P18848 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF4P18848 MIR762-201ENST00000390236 83 ntBASIC19.58■□□□□ 0.72
ATF4P18848 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.58■□□□□ 0.72
ATF4P18848 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF4P18848 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF4P18848 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ATF4P18848 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATF4P18848 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF4P18848 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.57■□□□□ 0.72
ATF4P18848 LINC00565-201ENST00000562710 2331 ntBASIC19.57■□□□□ 0.72
ATF4P18848 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.57■□□□□ 0.72
ATF4P18848 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF4P18848 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF4P18848 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ATF4P18848 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.57■□□□□ 0.72
ATF4P18848 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF4P18848 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF4P18848 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF4P18848 AC005559.1-201ENST00000589661 871 ntBASIC19.56■□□□□ 0.72
ATF4P18848 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF4P18848 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF4P18848 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF4P18848 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
ATF4P18848 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.55■□□□□ 0.72
ATF4P18848 AC087741.3-201ENST00000624270 1347 ntBASIC19.55■□□□□ 0.72
ATF4P18848 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.55■□□□□ 0.72
ATF4P18848 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF4P18848 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.55■□□□□ 0.72
ATF4P18848 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ATF4P18848 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF4P18848 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF4P18848 AC044849.2-201ENST00000606596 710 ntBASIC19.55■□□□□ 0.72
ATF4P18848 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATF4P18848 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATF4P18848 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ATF4P18848 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ATF4P18848 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.54■□□□□ 0.72
ATF4P18848 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.54■□□□□ 0.72
ATF4P18848 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF4P18848 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF4P18848 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF4P18848 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATF4P18848 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF4P18848 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF4P18848 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATF4P18848 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
ATF4P18848 DUX4L28-201ENST00000623687 678 ntBASIC19.53■□□□□ 0.72
ATF4P18848 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATF4P18848 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATF4P18848 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATF4P18848 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATF4P18848 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.52■□□□□ 0.72
ATF4P18848 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATF4P18848 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATF4P18848 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATF4P18848 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ATF4P18848 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ATF4P18848 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF4P18848 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATF4P18848 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF4P18848 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.51■□□□□ 0.71
ATF4P18848 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF4P18848 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF4P18848 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF4P18848 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF4P18848 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATF4P18848 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF4P18848 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.5■□□□□ 0.71
ATF4P18848 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.5■□□□□ 0.71
ATF4P18848 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF4P18848 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATF4P18848 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.5■□□□□ 0.71
ATF4P18848 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.49■□□□□ 0.71
ATF4P18848 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATF4P18848 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATF4P18848 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF4P18848 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.48■□□□□ 0.71
ATF4P18848 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.48■□□□□ 0.71
ATF4P18848 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.48■□□□□ 0.71
ATF4P18848 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 AL117328.2-201ENST00000624617 1940 ntBASIC19.48■□□□□ 0.71
ATF4P18848 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF4P18848 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF4P18848 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms