Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 AC022413.1-201ENST00000624602 984 ntBASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV10-1A0A0K0K1A3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV10-1A0A0K0K1A3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV10-1A0A0K0K1A3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV10-1A0A0K0K1A3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 AC141586.4-201ENST00000624558 1573 ntBASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV10-1A0A0K0K1A3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 AC093536.1-201ENST00000569153 554 ntBASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 AC007029.1-201ENST00000604183 313 ntBASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRBV10-1A0A0K0K1A3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV10-1A0A0K0K1A3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 MIR6089-201ENST00000616698 64 ntBASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 LINC01124-201ENST00000409786 2117 ntBASIC16.66■□□□□ 0.26
TRBV10-1A0A0K0K1A3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV10-1A0A0K0K1A3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV10-1A0A0K0K1A3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV10-1A0A0K0K1A3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRBV10-1A0A0K0K1A3 LINC00543-201ENST00000567234 1845 ntBASIC16.64■□□□□ 0.25
TRBV10-1A0A0K0K1A3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV10-1A0A0K0K1A3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV10-1A0A0K0K1A3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms