Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 MIR6765-201ENST00000614092 87 ntBASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 DUX4L9-201ENST00000449051 1259 ntBASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 AC145676.1-201ENST00000514988 2004 ntBASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV23-1A0A0A0MS06 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 AC012354.3-201ENST00000623734 483 ntBASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 DUSP8P4-201ENST00000399538 1761 ntBASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 AC091060.1-201ENST00000623524 1766 ntBASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV23-1A0A0A0MS06 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV23-1A0A0A0MS06 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.83■□□□□ 0.77
TRBV23-1A0A0A0MS06 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV23-1A0A0A0MS06 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRBV23-1A0A0A0MS06 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV23-1A0A0A0MS06 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRBV23-1A0A0A0MS06 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV23-1A0A0A0MS06 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV23-1A0A0A0MS06 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV23-1A0A0A0MS06 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 SPCS2P3-201ENST00000500401 656 ntBASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV23-1A0A0A0MS06 CLDN5-201ENST00000403084 2357 ntBASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 AC133561.1-201ENST00000568600 2415 ntBASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV23-1A0A0A0MS06 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 TSPY13P-201ENST00000338964 914 ntBASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 ATP5G2P3-201ENST00000429083 425 ntBASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 ERN1-208ENST00000606895 2068 ntBASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV23-1A0A0A0MS06 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV23-1A0A0A0MS06 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 AC004987.1-201ENST00000428627 508 ntBASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV23-1A0A0A0MS06 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV23-1A0A0A0MS06 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms