Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 HSD17B1P1-201ENST00000590052 955 ntBASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 AC026202.3-201ENST00000600805 1127 ntBASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV1A0A0A0MS02 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 RAP2CP1-202ENST00000605179 643 ntBASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 AC133552.2-201ENST00000619106 1032 ntBASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV1A0A0A0MS02 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV1A0A0A0MS02 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV1A0A0A0MS02 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV1A0A0A0MS02 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV1A0A0A0MS02 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV1A0A0A0MS02 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 RARRES2P2-201ENST00000394842 485 ntBASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 AC009831.1-201ENST00000580420 1582 ntBASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV1A0A0A0MS02 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV1A0A0A0MS02 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV1A0A0A0MS02 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRGV1A0A0A0MS02 AC022211.4-201ENST00000625094 2161 ntBASIC17.08■□□□□ 0.33
TRGV1A0A0A0MS02 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.08■□□□□ 0.33
TRGV1A0A0A0MS02 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV1A0A0A0MS02 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.08■□□□□ 0.32
TRGV1A0A0A0MS02 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV1A0A0A0MS02 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV1A0A0A0MS02 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV1A0A0A0MS02 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV1A0A0A0MS02 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 AC142381.3-201ENST00000568208 1670 ntBASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV1A0A0A0MS02 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV1A0A0A0MS02 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 KRT18P10-201ENST00000388836 1287 ntBASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV1A0A0A0MS02 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms