Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SAA2-SAA4A0A096LPE2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SAA2-SAA4A0A096LPE2 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.38■□□□□ 0.69
SAA2-SAA4A0A096LPE2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SAA2-SAA4A0A096LPE2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SAA2-SAA4A0A096LPE2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SAA2-SAA4A0A096LPE2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SAA2-SAA4A0A096LPE2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SAA2-SAA4A0A096LPE2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SAA2-SAA4A0A096LPE2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SAA2-SAA4A0A096LPE2 AC009831.1-201ENST00000580420 1582 ntBASIC19.36■□□□□ 0.69
SAA2-SAA4A0A096LPE2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SAA2-SAA4A0A096LPE2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SAA2-SAA4A0A096LPE2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SAA2-SAA4A0A096LPE2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.33■□□□□ 0.69
SAA2-SAA4A0A096LPE2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 AC133552.2-201ENST00000619106 1032 ntBASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SAA2-SAA4A0A096LPE2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA2-SAA4A0A096LPE2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA2-SAA4A0A096LPE2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SAA2-SAA4A0A096LPE2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 AC093323.1-202ENST00000635031 2045 ntBASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 AL139125.2-201ENST00000623134 1869 ntBASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 KRT18P10-201ENST00000388836 1287 ntBASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RARRES2P2-201ENST00000394842 485 ntBASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 HSD17B1P1-201ENST00000590052 955 ntBASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 AP003733.4-201ENST00000623785 1697 ntBASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.29■□□□□ 0.68
SAA2-SAA4A0A096LPE2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.28■□□□□ 0.68
SAA2-SAA4A0A096LPE2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms