Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.71e-7■□□□□ 9.8
GTF2F1P35269 SEMA3B-214ENST00000619119 3158 ntTSL 519.23■□□□□ 0.671e-7■□□□□ 9.8
GTF2F1P35269 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.41e-7■□□□□ 9.8
GTF2F1P35269 TBC1D8-205ENST00000473937 1093 ntTSL 216.09■□□□□ 0.175e-7■□□□□ 9.8
GTF2F1P35269 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.96■□□□□ 0.145e-7■□□□□ 9.8
GTF2F1P35269 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.145e-7■□□□□ 9.8
GTF2F1P35269 TBC1D8-206ENST00000481317 573 ntTSL 411.16□□□□□ -0.625e-7■□□□□ 9.8
GTF2F1P35269 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.893e-7■□□□□ 9.7
GTF2F1P35269 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.693e-7■□□□□ 9.7
GTF2F1P35269 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.243e-7■□□□□ 9.7
GTF2F1P35269 SDCCAG3-203ENST00000371723 865 ntTSL 228.52■■■□□ 2.163e-7■□□□□ 9.7
GTF2F1P35269 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.07■■■□□ 2.083e-7■□□□□ 9.7
GTF2F1P35269 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.793e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.14■■□□□ 1.293e-7■□□□□ 9.7
GTF2F1P35269 AP2A1-205ENST00000597774 2196 ntTSL 521.6■■□□□ 1.053e-7■□□□□ 9.7
GTF2F1P35269 AC005726.2-203ENST00000584196 2103 ntTSL 221.55■■□□□ 1.043e-7■□□□□ 9.7
GTF2F1P35269 MIGA2-210ENST00000483458 2532 ntTSL 220.69■□□□□ 0.93e-7■□□□□ 9.7
GTF2F1P35269 SSU72-203ENST00000378725 619 ntTSL 220.16■□□□□ 0.823e-7■□□□□ 9.7
GTF2F1P35269 SDCCAG3-206ENST00000446833 459 ntTSL 319.5■□□□□ 0.713e-7■□□□□ 9.7
GTF2F1P35269 SGK494-203ENST00000469832 602 ntTSL 317.34■□□□□ 0.373e-7■□□□□ 9.7
GTF2F1P35269 AP2A1-206ENST00000600199 2381 ntTSL 517.09■□□□□ 0.333e-7■□□□□ 9.7
GTF2F1P35269 LZTR1-210ENST00000464807 566 ntTSL 216.55■□□□□ 0.243e-7■□□□□ 9.7
GTF2F1P35269 LZTR1-205ENST00000439171 635 ntTSL 516.42■□□□□ 0.223e-7■□□□□ 9.7
GTF2F1P35269 LZTR1-213ENST00000491432 527 ntTSL 316.07■□□□□ 0.163e-7■□□□□ 9.7
GTF2F1P35269 MIGA2-203ENST00000439290 4345 ntTSL 215.9■□□□□ 0.143e-7■□□□□ 9.7
GTF2F1P35269 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.113e-7■□□□□ 9.7
GTF2F1P35269 MIGA2-204ENST00000445183 3598 ntTSL 215.09■□□□□ 0.013e-7■□□□□ 9.7
GTF2F1P35269 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.043e-7■□□□□ 9.7
GTF2F1P35269 SGK494-212ENST00000581199 866 ntTSL 1 (best)14.57□□□□□ -0.083e-7■□□□□ 9.7
GTF2F1P35269 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.143e-7■□□□□ 9.7
GTF2F1P35269 LZTR1-209ENST00000463909 3505 ntTSL 1 (best)13.77□□□□□ -0.23e-7■□□□□ 9.7
GTF2F1P35269 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.243e-7■□□□□ 9.7
GTF2F1P35269 SGK494-207ENST00000527863 598 ntTSL 213.32□□□□□ -0.283e-7■□□□□ 9.7
GTF2F1P35269 LZTR1-207ENST00000452988 878 ntTSL 313.02□□□□□ -0.333e-7■□□□□ 9.7
GTF2F1P35269 SGK494-209ENST00000530121 581 ntTSL 312.97□□□□□ -0.333e-7■□□□□ 9.7
GTF2F1P35269 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.353e-7■□□□□ 9.7
GTF2F1P35269 SGK494-206ENST00000526073 571 ntTSL 412.66□□□□□ -0.383e-7■□□□□ 9.7
GTF2F1P35269 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC12.54□□□□□ -0.43e-7■□□□□ 9.7
GTF2F1P35269 SGK494-205ENST00000525510 559 ntTSL 412.25□□□□□ -0.453e-7■□□□□ 9.7
GTF2F1P35269 AC005726.2-202ENST00000531839 1033 ntAPPRIS P5 TSL 211.98□□□□□ -0.493e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-208ENST00000511248 668 ntTSL 211.55□□□□□ -0.563e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-203ENST00000397006 425 ntTSL 39.86□□□□□ -0.833e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-206ENST00000506652 1082 ntTSL 58.95□□□□□ -0.983e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.47□□□□□ -1.053e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.53e-7■□□□□ 9.7
GTF2F1P35269 PRKAA1-207ENST00000509874 692 ntTSL 45.51□□□□□ -1.533e-7■□□□□ 9.7
GTF2F1P35269 HLF-207ENST00000573422 493 ntTSL 412.74□□□□□ -0.372e-7■□□□□ 9.7
GTF2F1P35269 HLF-206ENST00000573020 414 ntTSL 49.48□□□□□ -0.892e-7■□□□□ 9.7
GTF2F1P35269 HLF-211ENST00000575868 558 ntTSL 46.15□□□□□ -1.422e-7■□□□□ 9.7
GTF2F1P35269 GATA2-204ENST00000489987 1433 ntTSL 221.97■■□□□ 1.111e-8■□□□□ 9.7
GTF2F1P35269 PGGHG-208ENST00000529087 745 ntTSL 219.3■□□□□ 0.682e-10■□□□□ 9.7
GTF2F1P35269 C2orf82-207ENST00000476690 490 ntTSL 326.38■■□□□ 1.813e-6■□□□□ 9.7
GTF2F1P35269 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.96■■□□□ 1.593e-8■□□□□ 9.7
GTF2F1P35269 C2orf82-205ENST00000449331 466 ntTSL 323.96■■□□□ 1.433e-6■□□□□ 9.7
GTF2F1P35269 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.413e-6■□□□□ 9.7
GTF2F1P35269 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)23.64■■□□□ 1.373e-6■□□□□ 9.7
GTF2F1P35269 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.378e-9■□□□□ 9.7
GTF2F1P35269 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.79■■□□□ 1.243e-6■□□□□ 9.7
GTF2F1P35269 COASY-213ENST00000591753 2225 ntTSL 1 (best)20.38■□□□□ 0.853e-6■□□□□ 9.7
GTF2F1P35269 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.743e-6■□□□□ 9.7
GTF2F1P35269 NOP56-220ENST00000616692 2662 ntTSL 1 (best)18.73■□□□□ 0.598e-9■□□□□ 9.7
GTF2F1P35269 COASY-209ENST00000588353 387 ntTSL 317.83■□□□□ 0.443e-6■□□□□ 9.7
GTF2F1P35269 MST1P2-201ENST00000457982 2291 ntBASIC17.09■□□□□ 0.333e-6■□□□□ 9.7
GTF2F1P35269 COASY-214ENST00000591779 994 ntTSL 216.82■□□□□ 0.283e-6■□□□□ 9.7
GTF2F1P35269 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.06■□□□□ 0.163e-6■□□□□ 9.7
GTF2F1P35269 NOP56-219ENST00000612233 2980 nt15.98■□□□□ 0.158e-9■□□□□ 9.7
GTF2F1P35269 NOP56-216ENST00000492135 1143 ntTSL 1 (best)15.66■□□□□ 0.18e-9■□□□□ 9.7
GTF2F1P35269 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.023e-8■□□□□ 9.7
GTF2F1P35269 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.053e-6■□□□□ 9.7
GTF2F1P35269 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.193e-6■□□□□ 9.7
GTF2F1P35269 NOP56-206ENST00000466447 1094 ntTSL 213.33□□□□□ -0.288e-9■□□□□ 9.7
GTF2F1P35269 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.43e-8■□□□□ 9.7
GTF2F1P35269 NOP56-202ENST00000415272 1628 ntTSL 511.57□□□□□ -0.568e-9■□□□□ 9.7
GTF2F1P35269 CCDC85C-203ENST00000554996 619 ntTSL 411.47□□□□□ -0.573e-8■□□□□ 9.7
GTF2F1P35269 NOP56-215ENST00000490753 640 ntTSL 211.23□□□□□ -0.618e-9■□□□□ 9.7
GTF2F1P35269 NOP56-205ENST00000462630 859 ntTSL 210.79□□□□□ -0.688e-9■□□□□ 9.7
GTF2F1P35269 NOP56-207ENST00000467196 1320 ntTSL 59.87□□□□□ -0.838e-9■□□□□ 9.7
GTF2F1P35269 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.038e-9■□□□□ 9.7
GTF2F1P35269 NOP56-211ENST00000471023 592 ntTSL 28.08□□□□□ -1.128e-9■□□□□ 9.7
GTF2F1P35269 NOP56-212ENST00000480447 651 ntTSL 27.03□□□□□ -1.288e-9■□□□□ 9.7
GTF2F1P35269 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.18■■■□□ 2.264e-6■□□□□ 9.6
GTF2F1P35269 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.514e-6■□□□□ 9.6
GTF2F1P35269 SIGMAR1-202ENST00000353468 1582 ntTSL 1 (best)20.94■□□□□ 0.944e-6■□□□□ 9.6
GTF2F1P35269 HSP90B1-202ENST00000540297 590 ntTSL 321.73■■□□□ 1.072e-47■□□□□ 9.6
GTF2F1P35269 MIR3652-201ENST00000579335 131 ntBASIC20.31■□□□□ 0.842e-47■□□□□ 9.6
GTF2F1P35269 HSP90B1-204ENST00000548622 839 ntTSL 219.81■□□□□ 0.762e-47■□□□□ 9.6
GTF2F1P35269 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.64■□□□□ 0.732e-47■□□□□ 9.6
GTF2F1P35269 HSP90B1-205ENST00000549334 581 ntTSL 419.33■□□□□ 0.682e-47■□□□□ 9.6
GTF2F1P35269 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.672e-47■□□□□ 9.6
GTF2F1P35269 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.492e-47■□□□□ 9.6
GTF2F1P35269 HSP90B1-203ENST00000548462 3032 ntTSL 213.87□□□□□ -0.192e-47■□□□□ 9.6
GTF2F1P35269 RAB17-207ENST00000416106 587 ntTSL 316.58■□□□□ 0.243e-6■□□□□ 9.6
GTF2F1P35269 PTBP1-207ENST00000585932 1030 ntTSL 323.2■■□□□ 1.34e-8■□□□□ 9.6
GTF2F1P35269 PTBP1-208ENST00000585956 767 ntTSL 322.5■■□□□ 1.194e-8■□□□□ 9.6
GTF2F1P35269 PTBP1-219ENST00000621737 1125 ntTSL 521.88■■□□□ 1.094e-8■□□□□ 9.6
GTF2F1P35269 PTBP1-215ENST00000589883 683 ntTSL 321.57■■□□□ 1.044e-8■□□□□ 9.6
GTF2F1P35269 ANK1-207ENST00000518061 892 ntTSL 316.66■□□□□ 0.264e-7■□□□□ 9.6
GTF2F1P35269 PTBP1-205ENST00000585535 314 ntTSL 312.68□□□□□ -0.384e-8■□□□□ 9.6
GTF2F1P35269 ANK1-209ENST00000520299 3587 ntTSL 211.94□□□□□ -0.54e-7■□□□□ 9.6
GTF2F1P35269 ANK1-214ENST00000524227 3825 ntTSL 1 (best)10.33□□□□□ -0.764e-7■□□□□ 9.6
Retrieved 100 of 18,214 protein–RNA pairs in 360.3 ms