RNA–Protein interactions for RNA: ENST00000585535.2

PTBP1-205, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-205ENST00000585535 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
PTBP1-205ENST00000585535 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
PTBP1-205ENST00000585535 ABCC9O60706 1549 aa24.81■■□□□ 1.56
PTBP1-205ENST00000585535 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
PTBP1-205ENST00000585535 NACADO15069 1562 aa23.75■■□□□ 1.39
PTBP1-205ENST00000585535 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
PTBP1-205ENST00000585535 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
PTBP1-205ENST00000585535 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
PTBP1-205ENST00000585535 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
PTBP1-205ENST00000585535 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
PTBP1-205ENST00000585535 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
PTBP1-205ENST00000585535 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
PTBP1-205ENST00000585535 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
PTBP1-205ENST00000585535 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
PTBP1-205ENST00000585535 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
PTBP1-205ENST00000585535 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
PTBP1-205ENST00000585535 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
PTBP1-205ENST00000585535 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
PTBP1-205ENST00000585535 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
PTBP1-205ENST00000585535 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
PTBP1-205ENST00000585535 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
PTBP1-205ENST00000585535 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
PTBP1-205ENST00000585535 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
PTBP1-205ENST00000585535 HMGXB3Q12766 1538 aa21.77■■□□□ 1.08
PTBP1-205ENST00000585535 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
PTBP1-205ENST00000585535 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
PTBP1-205ENST00000585535 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
PTBP1-205ENST00000585535 WIZO95785 1651 aa21.41■■□□□ 1.02
PTBP1-205ENST00000585535 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
PTBP1-205ENST00000585535 NESP48681 1621 aa21.4■■□□□ 1.02
PTBP1-205ENST00000585535 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
PTBP1-205ENST00000585535 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
PTBP1-205ENST00000585535 CUX2O14529 1486 aa21.32■■□□□ 1
PTBP1-205ENST00000585535 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
PTBP1-205ENST00000585535 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
PTBP1-205ENST00000585535 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
PTBP1-205ENST00000585535 THOC2Q8NI27 1593 aaKnown RBP21.12■□□□□ 0.97
PTBP1-205ENST00000585535 CFTRP13569 1480 aa21.11■□□□□ 0.97
PTBP1-205ENST00000585535 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
PTBP1-205ENST00000585535 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
PTBP1-205ENST00000585535 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
PTBP1-205ENST00000585535 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
PTBP1-205ENST00000585535 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
PTBP1-205ENST00000585535 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
PTBP1-205ENST00000585535 WDR62O43379 1518 aa20.94■□□□□ 0.94
PTBP1-205ENST00000585535 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
PTBP1-205ENST00000585535 URB2Q14146 1524 aaKnown RBP20.79■□□□□ 0.92
PTBP1-205ENST00000585535 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
PTBP1-205ENST00000585535 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
PTBP1-205ENST00000585535 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
PTBP1-205ENST00000585535 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
PTBP1-205ENST00000585535 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
PTBP1-205ENST00000585535 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
PTBP1-205ENST00000585535 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
PTBP1-205ENST00000585535 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
PTBP1-205ENST00000585535 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
PTBP1-205ENST00000585535 SOGA1O94964 1423 aa20.38■□□□□ 0.85
PTBP1-205ENST00000585535 CUX1P39880 1505 aa20.37■□□□□ 0.85
PTBP1-205ENST00000585535 AQRO60306 1485 aaKnown RBP eCLIP20.35■□□□□ 0.853e-16■■■■■ 41.5
PTBP1-205ENST00000585535 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
PTBP1-205ENST00000585535 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.85
PTBP1-205ENST00000585535 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
PTBP1-205ENST00000585535 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
PTBP1-205ENST00000585535 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
PTBP1-205ENST00000585535 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.824e-6■□□□□ 10.4
PTBP1-205ENST00000585535 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
PTBP1-205ENST00000585535 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
PTBP1-205ENST00000585535 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
PTBP1-205ENST00000585535 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
PTBP1-205ENST00000585535 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
PTBP1-205ENST00000585535 FBLN2P98095 1184 aa20.12■□□□□ 0.81
PTBP1-205ENST00000585535 BIVM-ERCC5R4GMW8 1640 aa20.12■□□□□ 0.81
PTBP1-205ENST00000585535 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
PTBP1-205ENST00000585535 CHD1O14646 1710 aa20.1■□□□□ 0.81
PTBP1-205ENST00000585535 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
PTBP1-205ENST00000585535 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
PTBP1-205ENST00000585535 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
PTBP1-205ENST00000585535 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
PTBP1-205ENST00000585535 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
PTBP1-205ENST00000585535 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
PTBP1-205ENST00000585535 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
PTBP1-205ENST00000585535 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
PTBP1-205ENST00000585535 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
PTBP1-205ENST00000585535 PBRM1Q86U86 1689 aa20■□□□□ 0.79
PTBP1-205ENST00000585535 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
PTBP1-205ENST00000585535 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
PTBP1-205ENST00000585535 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
PTBP1-205ENST00000585535 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
PTBP1-205ENST00000585535 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
PTBP1-205ENST00000585535 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
PTBP1-205ENST00000585535 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
PTBP1-205ENST00000585535 NUP160Q12769 1436 aa19.84■□□□□ 0.77
PTBP1-205ENST00000585535 IGF1RP08069 1367 aa19.79■□□□□ 0.76
PTBP1-205ENST00000585535 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
PTBP1-205ENST00000585535 CEP170Q5SW79 1584 aa19.75■□□□□ 0.75
PTBP1-205ENST00000585535 SHROOM2Q13796 1616 aa19.69■□□□□ 0.74
PTBP1-205ENST00000585535 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
PTBP1-205ENST00000585535 CUL7Q14999 1698 aa19.64■□□□□ 0.73
PTBP1-205ENST00000585535 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
PTBP1-205ENST00000585535 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms